Analysis of interatomic Contacts of Structural Units in PDB entry:
2PL3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2PL3 entry

There is 1 chain in PDB entry 2PL3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 45GLU 278
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 13 helices in PDB entry 2PL3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
46 59Right-handed alpha
Helix 2
2
A
64 68Right-handed 310
Helix 3
3
A
70 74Right-handed 310
Helix 4
4
A
77 87Right-handed alpha
Helix 5
5
A
93 105Right-handed alpha
Helix 6
6
A
118 134Right-handed alpha
Helix 7
7
A
137 141Right-handed 310
Helix 8
8
A
150 165Right-handed alpha
Helix 9
9
A
181 189Right-handed alpha
Helix 10
10
A
197 208Right-handed alpha
Helix 11
11
A
223 230Right-handed alpha
Helix 12
12
A
232 242Right-handed alpha
Helix 13
13
A
257 267Right-handed alpha
Back to top of page

There is 1 sheet ( A) in PDB entry 2PL3.

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
172 175first strand
Strand 2
A
193 196parallel
Strand 3
A
144 147parallel
Strand 4
A
218 221parallel
Strand 5
A
248 253parallel
Strand 6
A
109 112parallel
Strand 7
A
272 275parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il