Analysis of interatomic Contacts of Structural Units in PDB entry:
2PL5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2PL5 entry

There is 1 chain in PDB entry 2PL5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 5ASN 366
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 2PL5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
118 122Right-handed 310
Helix 2
2
A
126 141Right-handed alpha
Helix 3
3
A
153 166Right-handed alpha
Helix 4
4
A
183 199Right-handed alpha
Helix 5
5
A
203 207Right-handed 310
Helix 6
6
A
213 227Right-handed alpha
Helix 7
7
A
230 239Right-handed alpha
Helix 8
8
A
255 260Right-handed 310
Helix 9
9
A
270 284Right-handed alpha
Helix 10
10
A
288 297Right-handed alpha
Helix 11
11
A
315 329Right-handed alpha
Helix 12
12
A
344 349Right-handed 310
Helix 13
13
A
351 364Right-handed alpha
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There are 3 sheets in PDB entry 2PL5. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
13 17first strand
Strand 2
A
31 39anti-parallel
Strand 3
A
91 95anti-parallel
Strand 4
A
48 52parallel
Strand 5
A
146 152parallel
Strand 6
A
170 176parallel
Strand 7
A
302 308parallel
Strand 8
A
333 338parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
20 21first strand
Strand 2
A
27 28anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
79 80first strand
Strand 2
A
85 86parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il