Analysis of interatomic Contacts of Structural Units in PDB entry:
2PO0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2PO0 entry

There are 2 chains in PDB entry 2PO0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 9GLU 244
B
 ALA 8GLN 274
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 2PO0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
95 110Right-handed alpha
Helix 2
2
A
111 113Right-handed 310
Helix 3
3
A
114 118Right-handed 310
Helix 4
4
A
135 151Right-handed alpha
Helix 5
5
A
176 183Right-handed alpha
Helix 6
6
A
193 196Right-handed 310
Helix 7
7
A
208 242Right-handed alpha
Helix 8
8
B
9 21Right-handed alpha
Helix 9
9
B
100 118Right-handed alpha
Helix 10
10
B
121 124Right-handed 310
Helix 11
11
B
148 164Right-handed alpha
Helix 12
12
B
210 217Right-handed alpha
Helix 13
13
B
243 272Right-handed alpha
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There are 8 sheets in PDB entry 2PO0. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
12 13first strand
Strand 2
A
16 17anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
29 33first strand
Strand 2
A
41 47anti-parallel
Strand 3
A
50 61anti-parallel
Strand 4
A
121 131anti-parallel
Strand 5
A
74 81parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
170 173first strand
Strand 2
A
160 167anti-parallel
Strand 3
A
185 192anti-parallel
Strand 4
A
197 201anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
170 173first strand
Strand 2
A
160 167anti-parallel
Strand 3
A
185 192anti-parallel
Strand 4
A
204 205anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
36 40first strand
Strand 2
B
48 54anti-parallel
Strand 3
B
57 68anti-parallel
Strand 4
B
132 144anti-parallel
Strand 5
B
79 86parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
36 40first strand
Strand 2
B
48 54anti-parallel
Strand 3
B
57 68anti-parallel
Strand 4
B
132 144anti-parallel
Strand 5
B
126 128anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
165 171first strand
Strand 2
B
178 186anti-parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
204 207first strand
Strand 2
B
194 201anti-parallel
Strand 3
B
219 225anti-parallel
Strand 4
B
231 237anti-parallel
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