Analysis of interatomic Contacts of Structural Units in PDB entry:
2PO4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2PO4 entry

There is 1 chain in PDB entry 2PO4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 11LYS 1104
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 55 helices in PDB entry 2PO4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 16Right-handed alpha
Helix 2
2
A
32 37Right-handed alpha
Helix 3
3
A
53 63Right-handed alpha
Helix 4
4
A
64 73Right-handed alpha
Helix 5
5
A
82 112Right-handed alpha
Helix 6
6
A
117 123Right-handed alpha
Helix 7
7
A
125 129Right-handed 310
Helix 8
8
A
132 136Right-handed 310
Helix 9
9
A
148 170Right-handed alpha
Helix 10
10
A
174 183Right-handed alpha
Helix 11
11
A
185 189Right-handed 310
Helix 12
12
A
190 198Right-handed alpha
Helix 13
13
A
203 219Right-handed alpha
Helix 14
14
A
227 232Right-handed alpha
Helix 15
15
A
232 249Right-handed alpha
Helix 16
16
A
282 287Right-handed 310
Helix 17
17
A
289 296Right-handed alpha
Helix 18
18
A
325 338Right-handed alpha
Helix 19
19
A
343 354Right-handed alpha
Helix 20
20
A
354 363Right-handed alpha
Helix 21
21
A
368 372Right-handed 310
Helix 22
22
A
373 405Right-handed alpha
Helix 23
23
A
407 411Right-handed 310
Helix 24
24
A
436 441Right-handed alpha
Helix 25
25
A
457 471Right-handed alpha
Helix 26
26
A
474 478Right-handed 310
Helix 27
27
A
479 493Right-handed alpha
Helix 28
28
A
495 509Right-handed alpha
Helix 29
29
A
514 524Right-handed alpha
Helix 30
30
A
525 527Right-handed 310
Helix 31
31
A
528 544Right-handed alpha
Helix 32
32
A
546 549Right-handed 310
Helix 33
33
A
562 573Right-handed alpha
Helix 34
34
A
578 587Right-handed alpha
Helix 35
35
A
598 606Right-handed alpha
Helix 36
36
A
610 630Right-handed alpha
Helix 37
37
A
633 651Right-handed alpha
Helix 38
38
A
671 678Right-handed alpha
Helix 39
39
A
681 711Right-handed alpha
Helix 40
40
A
715 722Right-handed alpha
Helix 41
41
A
727 747Right-handed alpha
Helix 42
42
A
778 793Right-handed alpha
Helix 43
43
A
793 806Right-handed alpha
Helix 44
44
A
806 843Right-handed alpha
Helix 45
45
A
855 866Right-handed alpha
Helix 46
46
A
867 870Right-handed 310
Helix 47
47
A
918 928Right-handed alpha
Helix 48
48
A
928 939Right-handed alpha
Helix 49
49
A
959 975Right-handed alpha
Helix 50
50
A
978 994Right-handed alpha
Helix 51
51
A
995 999Right-handed 310
Helix 52
52
A
1000 1012Right-handed alpha
Helix 53
53
A
1013 1018Right-handed alpha
Helix 54
54
A
1021 1053Right-handed alpha
Helix 55
55
A
1079 1104Right-handed alpha
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There are 14 sheets in PDB entry 2PO4. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 39first strand
Strand 2
A
221 222anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
138 141first strand
Strand 2
A
144 147anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
201 202first strand
Strand 2
A
270 275anti-parallel
Strand 3
A
252 257anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
304 305first strand
Strand 2
A
413 414anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
315 316first strand
Strand 2
A
319 323anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
341 342first strand
Strand 2
A
443 444anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
417 419first strand
Strand 2
A
425 427anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
448 450first strand
Strand 2
A
550 552anti-parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
947 948first strand
Strand 2
A
952 956anti-parallel
Strand 3
A
555 560anti-parallel
Strand 4
A
1060 1061anti-parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
590 592first strand
Strand 2
A
1055 1057anti-parallel
Strand 3
A
1067 1068anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
748 753first strand
Strand 2
A
756 761anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
873 874first strand
Strand 2
A
879 880anti-parallel
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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
884 887first strand
Strand 2
A
909 912anti-parallel
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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
894 896first strand
Strand 2
A
905 906anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il