Analysis of interatomic Contacts of Structural Units in PDB entry:
2PPS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2PPS entry

There are 6 chains in PDB entry 2PPS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 UNK 1UNK 478
B
 UNK 1UNK 503
L
 UNK 1UNK 111
K
 UNK 1UNK 64
F
 UNK 1UNK 130
C
 UNK 1UNK 80
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 47 helices in PDB entry 2PPS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 9Right-handed alpha
Helix 2
AA2
A
14 34Right-handed alpha
Helix 3
AB1
A
37 61Right-handed alpha
Helix 4
AB2
A
65 71Right-handed alpha
Helix 5
AC
A
80 102Right-handed alpha
Helix 6
AD
A
105 127Right-handed alpha
Helix 7
AE
A
135 144Right-handed alpha
Helix 8
AF
A
150 162Right-handed alpha
Helix 9
AG
A
166 184Right-handed alpha
Helix 10
AH2
A
234 239Right-handed alpha
Helix 11
AI
A
242 269Right-handed alpha
Helix 12
AJ
A
291 314Right-handed alpha
Helix 13
AK
A
330 356Right-handed alpha
Helix 14
AL
A
369 377Right-handed alpha
Helix 15
AM1
A
391 400Right-handed alpha
Helix 16
AM2
A
402 408Right-handed alpha
Helix 17
AN
A
411 422Right-handed alpha
Helix 18
AO
A
444 478Right-handed alpha
Helix 19
BA
B
1 21Right-handed alpha
Helix 20
BB
B
27 51Right-handed alpha
Helix 21
BC
B
63 90Right-handed alpha
Helix 22
BD
B
108 134Right-handed alpha
Helix 23
BE
B
141 155Right-handed alpha
Helix 24
BF
B
161 174Right-handed alpha
Helix 25
BG1
B
175 184Right-handed alpha
Helix 26
BG2
B
185 208Right-handed alpha
Helix 27
BH
B
225 244Right-handed alpha
Helix 28
BI
B
265 286Right-handed alpha
Helix 29
BJ
B
307 327Right-handed alpha
Helix 30
BK
B
354 371Right-handed alpha
Helix 31
BL
B
392 404Right-handed alpha
Helix 32
BM
B
408 424Right-handed alpha
Helix 33
BN
B
435 450Right-handed alpha
Helix 34
BO
B
471 503Right-handed alpha
Helix 35
P1
L
1 11Right-handed alpha
Helix 36
P2
L
20 46Right-handed alpha
Helix 37
Q
L
52 79Right-handed alpha
Helix 38
R
L
86 110Right-handed alpha
Helix 39
S
K
2 29Right-handed alpha
Helix 40
T
K
43 60Right-handed alpha
Helix 41
U
F
5 25Right-handed alpha
Helix 42
V
F
30 42Right-handed alpha
Helix 43
W
F
50 59Right-handed alpha
Helix 44
X
F
70 94Right-handed alpha
Helix 45
Y
F
105 128Right-handed alpha
Helix 46
CA
C
19 23Right-handed alpha
Helix 47
CB
C
56 59Right-handed alpha
Back to top of page
There are no sheets in PDB entry 2PPS
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il