Analysis of interatomic Contacts of Structural Units in PDB entry:
2PR8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2PR8 entry

There are 2 chains in PDB entry 2PR8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 11GLU 183
B
 ASP 11GLU 183
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 2PR8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
21 31Right-handed alpha
Helix 2
2
A
47 56Right-handed alpha
Helix 3
3
A
56 63Right-handed alpha
Helix 4
4
A
119 131Right-handed alpha
Helix 5
5
A
147 157Right-handed alpha
Helix 6
6
A
179 183Right-handed alpha
Helix 7
7
B
19 21Right-handed 310
Helix 8
8
B
22 31Right-handed alpha
Helix 9
9
B
47 56Right-handed alpha
Helix 10
10
B
56 63Right-handed alpha
Helix 11
11
B
119 132Right-handed alpha
Helix 12
12
B
147 157Right-handed alpha
Helix 13
13
B
179 183Right-handed alpha
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There are 2 sheets in PDB entry 2PR8. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
13 17first strand
Strand 2
A
65 72anti-parallel
Strand 3
A
75 84anti-parallel
Strand 4
A
101 105anti-parallel
Strand 5
A
138 141parallel
Strand 6
A
170 178anti-parallel
Strand 7
A
160 167anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
13 17first strand
Strand 2
B
65 72anti-parallel
Strand 3
B
75 84anti-parallel
Strand 4
B
101 105anti-parallel
Strand 5
B
138 141parallel
Strand 6
B
170 178anti-parallel
Strand 7
B
160 167anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il