Analysis of interatomic Contacts of Structural Units in PDB entry:
2PRY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2PRY entry

There is 1 chain in PDB entry 2PRY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 2ALA 225
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 2PRY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
5 18Right-handed alpha
Helix 2
2
A
40 43Right-handed 310
Helix 3
3
A
45 63Right-handed alpha
Helix 4
4
A
76 92Right-handed alpha
Helix 5
5
A
93 97Right-handed 310
Helix 6
6
A
139 150Right-handed alpha
Helix 7
7
A
176 186Right-handed alpha
Helix 8
8
A
195 202Right-handed alpha
Helix 9
9
A
209 222Right-handed alpha
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There are 2 sheets in PDB entry 2PRY. Click on sheet of interest to get list of strands forming it: A, B,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
21 27first strand
Strand 2
A
33 38anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
117 118first strand
Strand 2
A
100 104anti-parallel
Strand 3
A
69 72parallel
Strand 4
A
126 130parallel
Strand 5
A
153 162parallel
Strand 6
A
189 194parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il