Analysis of interatomic Contacts of Structural Units in PDB entry:
2PUW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2PUW entry

There are 2 chains in PDB entry 2PUW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 349ASP 700
B
 PRO 349ASP 700
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 2PUW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
352 360Right-handed alpha
Helix 2
2
A
360 370Right-handed alpha
Helix 3
3
A
383 387Right-handed 310
Helix 4
4
A
388 394Right-handed alpha
Helix 5
5
A
403 422Right-handed alpha
Helix 6
6
A
430 437Right-handed alpha
Helix 7
7
A
455 468Right-handed alpha
Helix 8
8
A
481 487Right-handed alpha
Helix 9
9
A
504 522Right-handed alpha
Helix 10
10
A
528 552Right-handed alpha
Helix 11
11
A
552 560Right-handed alpha
Helix 12
12
A
561 563Right-handed 310
Helix 13
13
A
575 577Right-handed 310
Helix 14
14
A
578 592Right-handed alpha
Helix 15
15
A
629 642Right-handed alpha
Helix 16
16
A
672 695Right-handed alpha
Helix 17
17
B
352 360Right-handed alpha
Helix 18
18
B
360 370Right-handed alpha
Helix 19
19
B
382 386Right-handed 310
Helix 20
20
B
388 394Right-handed alpha
Helix 21
21
B
403 422Right-handed alpha
Helix 22
22
B
430 437Right-handed alpha
Helix 23
23
B
455 468Right-handed alpha
Helix 24
24
B
481 487Right-handed alpha
Helix 25
25
B
503 522Right-handed alpha
Helix 26
26
B
523 525Right-handed 310
Helix 27
27
B
528 550Right-handed alpha
Helix 28
28
B
552 560Right-handed alpha
Helix 29
29
B
575 577Right-handed 310
Helix 30
30
B
578 594Right-handed alpha
Helix 31
31
B
624 628Right-handed 310
Helix 32
32
B
629 641Right-handed alpha
Helix 33
33
B
672 694Right-handed alpha
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There are 6 sheets in PDB entry 2PUW. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
373 374first strand
Strand 2
A
379 380anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
425 429first strand
Strand 2
A
398 402parallel
Strand 3
A
445 450parallel
Strand 4
A
471 476parallel
Strand 5
A
489 492parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
596 601first strand
Strand 2
A
569 574parallel
Strand 3
A
619 622parallel
Strand 4
A
647 651parallel
Strand 5
A
664 668parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
373 374first strand
Strand 2
B
379 380anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
425 429first strand
Strand 2
B
398 402parallel
Strand 3
B
445 450parallel
Strand 4
B
471 476parallel
Strand 5
B
489 492parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
600 601first strand
Strand 2
B
571 574parallel
Strand 3
B
619 622parallel
Strand 4
B
647 650parallel
Strand 5
B
664 667parallel
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