Analysis of interatomic Contacts of Structural Units in PDB entry:
2PWM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2PWM entry

There are 8 chains in PDB entry 2PWM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 1TYR 145
B
 PRO 1TYR 145
C
 PRO 1TYR 145
D
 PRO 1TYR 145
E
 PRO 1TYR 145
F
 PRO 1TYR 145
G
 PRO 1TYR 145
H
 PRO 1TYR 145
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 64 helices in PDB entry 2PWM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 31Right-handed alpha
Helix 2
2
A
35 44Right-handed alpha
Helix 3
3
A
48 58Right-handed alpha
Helix 4
4
A
62 84Right-handed alpha
Helix 5
5
A
100 105Right-handed alpha
Helix 6
6
A
110 119Right-handed alpha
Helix 7
7
A
125 142Right-handed alpha
Helix 8
8
A
143 145Right-handed 310
Helix 9
9
B
16 31Right-handed alpha
Helix 10
10
B
35 44Right-handed alpha
Helix 11
11
B
48 59Right-handed alpha
Helix 12
12
B
62 84Right-handed alpha
Helix 13
13
B
100 105Right-handed alpha
Helix 14
14
B
110 119Right-handed alpha
Helix 15
15
B
125 142Right-handed alpha
Helix 16
16
B
143 145Right-handed 310
Helix 17
17
C
16 31Right-handed alpha
Helix 18
18
C
35 44Right-handed alpha
Helix 19
19
C
48 58Right-handed alpha
Helix 20
20
C
62 84Right-handed alpha
Helix 21
21
C
100 105Right-handed alpha
Helix 22
22
C
110 119Right-handed alpha
Helix 23
23
C
125 142Right-handed alpha
Helix 24
24
C
143 145Right-handed 310
Helix 25
25
D
16 31Right-handed alpha
Helix 26
26
D
35 44Right-handed alpha
Helix 27
27
D
48 57Right-handed alpha
Helix 28
28
D
62 84Right-handed alpha
Helix 29
29
D
100 105Right-handed alpha
Helix 30
30
D
110 119Right-handed alpha
Helix 31
31
D
125 142Right-handed alpha
Helix 32
32
D
143 145Right-handed 310
Helix 33
33
E
16 31Right-handed alpha
Helix 34
34
E
35 44Right-handed alpha
Helix 35
35
E
48 58Right-handed alpha
Helix 36
36
E
62 84Right-handed alpha
Helix 37
37
E
100 105Right-handed alpha
Helix 38
38
E
110 119Right-handed alpha
Helix 39
39
E
125 142Right-handed alpha
Helix 40
40
E
143 145Right-handed 310
Helix 41
41
F
16 31Right-handed alpha
Helix 42
42
F
35 44Right-handed alpha
Helix 43
43
F
48 58Right-handed alpha
Helix 44
44
F
62 84Right-handed alpha
Helix 45
45
F
100 105Right-handed alpha
Helix 46
46
F
110 119Right-handed alpha
Helix 47
47
F
125 142Right-handed alpha
Helix 48
48
F
143 145Right-handed 310
Helix 49
49
G
16 31Right-handed alpha
Helix 50
50
G
35 44Right-handed alpha
Helix 51
51
G
48 58Right-handed alpha
Helix 52
52
G
62 84Right-handed alpha
Helix 53
53
G
100 105Right-handed alpha
Helix 54
54
G
110 119Right-handed alpha
Helix 55
55
G
125 142Right-handed alpha
Helix 56
56
G
143 145Right-handed 310
Helix 57
57
H
16 31Right-handed alpha
Helix 58
58
H
35 44Right-handed alpha
Helix 59
59
H
48 57Right-handed alpha
Helix 60
60
H
62 84Right-handed alpha
Helix 61
61
H
100 105Right-handed alpha
Helix 62
62
H
110 119Right-handed alpha
Helix 63
63
H
125 142Right-handed alpha
Helix 64
64
H
143 145Right-handed 310
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There are 8 sheets in PDB entry 2PWM. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 4first strand
Strand 2
A
10 12anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2 4first strand
Strand 2
B
10 12anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
2 4first strand
Strand 2
C
10 12anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
2 4first strand
Strand 2
D
10 12anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
2 4first strand
Strand 2
E
10 12anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
2 4first strand
Strand 2
F
10 12anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
2 4first strand
Strand 2
G
10 12anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
2 4first strand
Strand 2
H
10 12anti-parallel
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