Analysis of interatomic Contacts of Structural Units in PDB entry:
2PY6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2PY6 entry

There is 1 chain in PDB entry 2PY6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 14TYR 408
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 2PY6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 16Right-handed 310
Helix 2
2
A
17 32Right-handed alpha
Helix 3
3
A
38 49Right-handed alpha
Helix 4
4
A
62 68Right-handed alpha
Helix 5
5
A
99 109Right-handed alpha
Helix 6
6
A
121 135Right-handed alpha
Helix 7
7
A
142 149Right-handed alpha
Helix 8
8
A
156 160Right-handed 310
Helix 9
9
A
162 169Right-handed alpha
Helix 10
10
A
169 180Right-handed alpha
Helix 11
11
A
182 199Right-handed alpha
Helix 12
12
A
201 208Right-handed alpha
Helix 13
13
A
210 214Right-handed 310
Helix 14
14
A
237 248Right-handed alpha
Helix 15
15
A
260 274Right-handed alpha
Helix 16
16
A
279 281Right-handed 310
Helix 17
17
A
326 331Right-handed alpha
Helix 18
18
A
345 352Right-handed alpha
Helix 19
19
A
353 361Right-handed alpha
Helix 20
20
A
373 386Right-handed alpha
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There are 3 sheets in PDB entry 2PY6. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
91 92first strand
Strand 2
A
95 98anti-parallel
Strand 3
A
76 81parallel
Strand 4
A
53 57parallel
Strand 5
A
113 117parallel
Strand 6
A
139 141parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
283 286first strand
Strand 2
A
253 257parallel
Strand 3
A
228 232parallel
Strand 4
A
337 340parallel
Strand 5
A
363 367parallel
Strand 6
A
403 408anti-parallel
Strand 7
A
390 395anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
289 290first strand
Strand 2
A
322 325parallel
Strand 3
A
295 297anti-parallel
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