Analysis of interatomic Contacts of Structural Units in PDB entry:
2PYU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2PYU entry

There is 1 chain in PDB entry 2PYU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS -11ASN 196
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 11 helices in PDB entry 2PYU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
10 22Right-handed alpha
Helix 2
2
A
45 62Right-handed alpha
Helix 3
3
A
76 78Right-handed 310
Helix 4
4
A
81 88Right-handed 310
Helix 5
5
A
94 107Right-handed alpha
Helix 6
6
A
110 113Right-handed 310
Helix 7
7
A
156 158Right-handed 310
Helix 8
8
A
162 166Right-handed 310
Helix 9
9
A
168 172Right-handed 310
Helix 10
10
A
173 181Right-handed alpha
Helix 11
11
A
181 194Right-handed alpha
Back to top of page

There is 1 sheet ( A) in PDB entry 2PYU.

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 30first strand
Strand 2
A
2 6parallel
Strand 3
A
65 74parallel
Strand 4
A
115 125anti-parallel
Strand 5
A
134 144anti-parallel
Strand 6
A
160 161anti-parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il