Analysis of interatomic Contacts of Structural Units in PDB entry:
2PZ0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2PZ0 entry

There are 2 chains in PDB entry 2PZ0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 11ARG 249
B
 MET 10GLY 252
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 2PZ0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
28 39Right-handed alpha
Helix 2
2
A
72 76Right-handed 310
Helix 3
3
A
77 82Right-handed alpha
Helix 4
4
A
91 95Right-handed 310
Helix 5
5
A
101 110Right-handed alpha
Helix 6
6
A
129 141Right-handed alpha
Helix 7
7
A
153 164Right-handed alpha
Helix 8
8
A
180 187Right-handed alpha
Helix 9
9
A
196 199Right-handed 310
Helix 10
10
A
200 210Right-handed alpha
Helix 11
11
A
221 232Right-handed alpha
Helix 12
12
A
240 249Right-handed alpha
Helix 13
13
B
28 39Right-handed alpha
Helix 14
14
B
72 76Right-handed 310
Helix 15
15
B
77 82Right-handed alpha
Helix 16
16
B
91 95Right-handed 310
Helix 17
17
B
101 110Right-handed alpha
Helix 18
18
B
129 141Right-handed alpha
Helix 19
19
B
153 164Right-handed alpha
Helix 20
20
B
180 187Right-handed alpha
Helix 21
21
B
196 199Right-handed 310
Helix 22
22
B
200 209Right-handed alpha
Helix 23
23
B
221 232Right-handed alpha
Helix 24
24
B
240 249Right-handed alpha
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There are 4 sheets in PDB entry 2PZ0. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 57first strand
Strand 2
A
42 49anti-parallel
Strand 3
A
115 120parallel
Strand 4
A
147 151parallel
Strand 5
A
168 173parallel
Strand 6
A
191 194parallel
Strand 7
A
213 214parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 57first strand
Strand 2
A
42 49anti-parallel
Strand 3
A
13 17parallel
Strand 4
A
235 238parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
55 57first strand
Strand 2
B
42 49anti-parallel
Strand 3
B
115 120parallel
Strand 4
B
147 151parallel
Strand 5
B
168 173parallel
Strand 6
B
191 194parallel
Strand 7
B
213 214parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
55 57first strand
Strand 2
B
42 49anti-parallel
Strand 3
B
13 17parallel
Strand 4
B
235 238parallel
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