Analysis of interatomic Contacts of Structural Units in PDB entry:
2PZ1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2PZ1 entry

There is 1 chain in PDB entry 2PZ1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 181ASP 611
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 2PZ1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
186 192Right-handed alpha
Helix 2
2
A
280 310Right-handed alpha
Helix 3
3
A
310 317Right-handed alpha
Helix 4
4
A
322 331Right-handed alpha
Helix 5
5
A
332 351Right-handed alpha
Helix 6
6
A
355 359Right-handed 310
Helix 7
7
A
361 368Right-handed alpha
Helix 8
8
A
368 373Right-handed alpha
Helix 9
9
A
374 394Right-handed alpha
Helix 10
10
A
395 410Right-handed alpha
Helix 11
11
A
415 440Right-handed alpha
Helix 12
12
A
447 485Right-handed alpha
Helix 13
13
A
492 497Right-handed alpha
Helix 14
14
A
590 610Right-handed alpha
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There are 2 sheets in PDB entry 2PZ1. Click on sheet of interest to get list of strands forming it: A, B,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
239 244first strand
Strand 2
A
231 236anti-parallel
Strand 3
A
220 225anti-parallel
Strand 4
A
197 201anti-parallel
Strand 5
A
248 250anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
541 548first strand
Strand 2
A
527 533anti-parallel
Strand 3
A
516 524anti-parallel
Strand 4
A
500 509anti-parallel
Strand 5
A
583 588anti-parallel
Strand 6
A
571 576anti-parallel
Strand 7
A
553 556anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il