Analysis of interatomic Contacts of Structural Units in PDB entry:
2PZB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2PZB entry

There are 4 chains in PDB entry 2PZB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1HIS 283
B
 MET 1HIS 283
C
 THR 2HIS 283
D
 MET 1HIS 282
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 48 helices in PDB entry 2PZB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 12Right-handed alpha
Helix 2
2
A
18 38Right-handed alpha
Helix 3
3
A
49 69Right-handed alpha
Helix 4
4
A
88 99Right-handed alpha
Helix 5
5
A
108 123Right-handed alpha
Helix 6
6
A
128 152Right-handed alpha
Helix 7
7
A
161 167Right-handed alpha
Helix 8
8
A
186 197Right-handed alpha
Helix 9
9
A
200 204Right-handed 310
Helix 10
10
A
228 237Right-handed alpha
Helix 11
11
A
242 256Right-handed alpha
Helix 12
12
A
266 282Right-handed alpha
Helix 13
13
B
2 11Right-handed alpha
Helix 14
14
B
18 38Right-handed alpha
Helix 15
15
B
49 69Right-handed alpha
Helix 16
16
B
88 99Right-handed alpha
Helix 17
17
B
108 123Right-handed alpha
Helix 18
18
B
128 152Right-handed alpha
Helix 19
19
B
161 167Right-handed alpha
Helix 20
20
B
186 197Right-handed alpha
Helix 21
21
B
200 204Right-handed 310
Helix 22
22
B
228 237Right-handed alpha
Helix 23
23
B
242 255Right-handed alpha
Helix 24
24
B
266 282Right-handed alpha
Helix 25
25
C
2 12Right-handed alpha
Helix 26
26
C
18 38Right-handed alpha
Helix 27
27
C
49 69Right-handed alpha
Helix 28
28
C
89 99Right-handed alpha
Helix 29
29
C
108 124Right-handed alpha
Helix 30
30
C
128 152Right-handed alpha
Helix 31
31
C
161 167Right-handed alpha
Helix 32
32
C
186 197Right-handed alpha
Helix 33
33
C
200 205Right-handed 310
Helix 34
34
C
228 237Right-handed alpha
Helix 35
35
C
242 255Right-handed alpha
Helix 36
36
C
266 282Right-handed alpha
Helix 37
37
D
2 11Right-handed alpha
Helix 38
38
D
18 38Right-handed alpha
Helix 39
39
D
49 69Right-handed alpha
Helix 40
40
D
89 99Right-handed alpha
Helix 41
41
D
108 124Right-handed alpha
Helix 42
42
D
128 152Right-handed alpha
Helix 43
43
D
161 167Right-handed alpha
Helix 44
44
D
186 197Right-handed alpha
Helix 45
45
D
200 205Right-handed 310
Helix 46
46
D
228 237Right-handed alpha
Helix 47
47
D
242 256Right-handed alpha
Helix 48
48
D
264 282Right-handed alpha
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There are 4 sheets in PDB entry 2PZB. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
102 105first strand
Strand 2
A
74 79parallel
Strand 3
A
41 45parallel
Strand 4
A
154 155parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
102 105first strand
Strand 2
B
74 79parallel
Strand 3
B
41 45parallel
Strand 4
B
154 155parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
102 105first strand
Strand 2
C
74 79parallel
Strand 3
C
41 45parallel
Strand 4
C
154 155parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
102 105first strand
Strand 2
D
74 79parallel
Strand 3
D
41 45parallel
Strand 4
D
154 155parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il