Analysis of interatomic Contacts of Structural Units in PDB entry:
2Q0Q


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2Q0Q entry

There are 8 chains in PDB entry 2Q0Q (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2LEU 216
B
 ALA 2LEU 216
C
 ALA 2LEU 216
D
 ALA 2LEU 216
E
 ALA 2LEU 216
F
 ALA 2LEU 216
G
 ALA 2LEU 216
H
 ALA 2LEU 216
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 77 helices in PDB entry 2Q0Q. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
10 15Right-handed alpha
Helix 2
2
A
33 43Right-handed alpha
Helix 3
3
A
69 82Right-handed alpha
Helix 4
4
A
93 101Right-handed 310
Helix 5
5
A
103 120Right-handed alpha
Helix 6
6
A
147 154Right-handed alpha
Helix 7
7
A
156 162Right-handed alpha
Helix 8
8
A
163 176Right-handed alpha
Helix 9
9
A
183 185Right-handed 310
Helix 10
10
A
197 216Right-handed alpha
Helix 11
11
B
10 15Right-handed alpha
Helix 12
12
B
33 43Right-handed alpha
Helix 13
13
B
69 82Right-handed alpha
Helix 14
14
B
93 101Right-handed 310
Helix 15
15
B
103 120Right-handed alpha
Helix 16
16
B
147 154Right-handed alpha
Helix 17
17
B
156 162Right-handed alpha
Helix 18
18
B
163 176Right-handed alpha
Helix 19
19
B
183 185Right-handed 310
Helix 20
20
B
197 216Right-handed alpha
Helix 21
21
C
10 15Right-handed alpha
Helix 22
22
C
33 43Right-handed alpha
Helix 23
23
C
69 82Right-handed alpha
Helix 24
24
C
93 101Right-handed 310
Helix 25
25
C
103 120Right-handed alpha
Helix 26
26
C
147 154Right-handed alpha
Helix 27
27
C
156 176Right-handed alpha
Helix 28
28
C
183 185Right-handed 310
Helix 29
29
C
197 216Right-handed alpha
Helix 30
30
D
10 15Right-handed alpha
Helix 31
31
D
33 43Right-handed alpha
Helix 32
32
D
69 82Right-handed alpha
Helix 33
33
D
93 101Right-handed 310
Helix 34
34
D
103 120Right-handed alpha
Helix 35
35
D
147 154Right-handed alpha
Helix 36
36
D
156 176Right-handed alpha
Helix 37
37
D
183 185Right-handed 310
Helix 38
38
D
197 216Right-handed alpha
Helix 39
39
E
10 15Right-handed alpha
Helix 40
40
E
33 43Right-handed alpha
Helix 41
41
E
69 82Right-handed alpha
Helix 42
42
E
93 101Right-handed 310
Helix 43
43
E
103 120Right-handed alpha
Helix 44
44
E
147 154Right-handed alpha
Helix 45
45
E
156 163Right-handed alpha
Helix 46
46
E
163 176Right-handed alpha
Helix 47
47
E
183 185Right-handed 310
Helix 48
48
E
197 216Right-handed alpha
Helix 49
49
F
10 15Right-handed alpha
Helix 50
50
F
33 43Right-handed alpha
Helix 51
51
F
69 82Right-handed alpha
Helix 52
52
F
93 101Right-handed 310
Helix 53
53
F
103 120Right-handed alpha
Helix 54
54
F
147 154Right-handed alpha
Helix 55
55
F
156 176Right-handed alpha
Helix 56
56
F
183 185Right-handed 310
Helix 57
57
F
197 216Right-handed alpha
Helix 58
58
G
10 15Right-handed alpha
Helix 59
59
G
33 43Right-handed alpha
Helix 60
60
G
69 82Right-handed alpha
Helix 61
61
G
93 101Right-handed 310
Helix 62
62
G
103 120Right-handed alpha
Helix 63
63
G
147 154Right-handed alpha
Helix 64
64
G
156 162Right-handed alpha
Helix 65
65
G
163 176Right-handed alpha
Helix 66
66
G
183 185Right-handed 310
Helix 67
67
G
197 216Right-handed alpha
Helix 68
68
H
10 15Right-handed alpha
Helix 69
69
H
33 43Right-handed alpha
Helix 70
70
H
69 82Right-handed alpha
Helix 71
71
H
93 101Right-handed 310
Helix 72
72
H
103 120Right-handed alpha
Helix 73
73
H
147 154Right-handed alpha
Helix 74
74
H
156 162Right-handed alpha
Helix 75
75
H
163 176Right-handed alpha
Helix 76
76
H
183 185Right-handed 310
Helix 77
77
H
197 216Right-handed alpha
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There are 8 sheets in PDB entry 2Q0Q. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 52first strand
Strand 2
A
3 9parallel
Strand 3
A
86 90parallel
Strand 4
A
133 138parallel
Strand 5
A
179 181parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
46 52first strand
Strand 2
B
3 9parallel
Strand 3
B
86 90parallel
Strand 4
B
133 138parallel
Strand 5
B
179 181parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
46 52first strand
Strand 2
C
3 9parallel
Strand 3
C
86 90parallel
Strand 4
C
133 138parallel
Strand 5
C
179 181parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
46 52first strand
Strand 2
D
3 9parallel
Strand 3
D
86 90parallel
Strand 4
D
133 138parallel
Strand 5
D
179 181parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
46 52first strand
Strand 2
E
3 9parallel
Strand 3
E
86 90parallel
Strand 4
E
133 138parallel
Strand 5
E
179 181parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
46 52first strand
Strand 2
F
3 9parallel
Strand 3
F
86 90parallel
Strand 4
F
133 138parallel
Strand 5
F
179 181parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
46 52first strand
Strand 2
G
3 9parallel
Strand 3
G
86 90parallel
Strand 4
G
133 138parallel
Strand 5
G
179 181parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
46 52first strand
Strand 2
H
3 9parallel
Strand 3
H
86 90parallel
Strand 4
H
133 138parallel
Strand 5
H
179 181parallel
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