Analysis of interatomic Contacts of Structural Units in PDB entry:
2Q0S


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2Q0S entry

There are 16 chains in PDB entry 2Q0S (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2ASP 10
A
 LEU 12LEU 216
B
 ALA 2ASP 10
B
 LEU 12LEU 216
C
 ALA 2ASP 10
C
 LEU 12LEU 216
D
 ALA 2ASP 10
D
 LEU 12LEU 216
E
 ALA 2ASP 10
E
 LEU 12LEU 216
F
 ALA 2ASP 10
F
 LEU 12LEU 216
G
 ALA 2ASP 10
G
 LEU 12LEU 216
H
 ALA 2ASP 10
H
 LEU 12LEU 216
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 78 helices in PDB entry 2Q0S. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
10 15Right-handed alpha
Helix 2
2
A
33 43Right-handed alpha
Helix 3
3
A
69 82Right-handed alpha
Helix 4
4
A
93 101Right-handed 310
Helix 5
5
A
103 120Right-handed alpha
Helix 6
6
A
147 154Right-handed alpha
Helix 7
7
A
156 162Right-handed alpha
Helix 8
8
A
163 176Right-handed alpha
Helix 9
9
A
183 185Right-handed 310
Helix 10
10
A
197 216Right-handed alpha
Helix 11
11
B
10 15Right-handed alpha
Helix 12
12
B
33 43Right-handed alpha
Helix 13
13
B
69 82Right-handed alpha
Helix 14
14
B
93 101Right-handed 310
Helix 15
15
B
103 120Right-handed alpha
Helix 16
16
B
147 154Right-handed alpha
Helix 17
17
B
156 163Right-handed alpha
Helix 18
18
B
163 176Right-handed alpha
Helix 19
19
B
183 185Right-handed 310
Helix 20
20
B
197 216Right-handed alpha
Helix 21
21
C
10 15Right-handed alpha
Helix 22
22
C
33 43Right-handed alpha
Helix 23
23
C
69 82Right-handed alpha
Helix 24
24
C
93 101Right-handed 310
Helix 25
25
C
103 120Right-handed alpha
Helix 26
26
C
147 154Right-handed alpha
Helix 27
27
C
156 162Right-handed alpha
Helix 28
28
C
163 176Right-handed alpha
Helix 29
29
C
183 185Right-handed 310
Helix 30
30
C
197 216Right-handed alpha
Helix 31
31
D
10 15Right-handed alpha
Helix 32
32
D
33 43Right-handed alpha
Helix 33
33
D
69 82Right-handed alpha
Helix 34
34
D
93 101Right-handed 310
Helix 35
35
D
103 120Right-handed alpha
Helix 36
36
D
147 154Right-handed alpha
Helix 37
37
D
156 176Right-handed alpha
Helix 38
38
D
183 185Right-handed 310
Helix 39
39
D
197 216Right-handed alpha
Helix 40
40
E
10 15Right-handed alpha
Helix 41
41
E
33 43Right-handed alpha
Helix 42
42
E
69 82Right-handed alpha
Helix 43
43
E
93 101Right-handed 310
Helix 44
44
E
103 120Right-handed alpha
Helix 45
45
E
147 154Right-handed alpha
Helix 46
46
E
156 163Right-handed alpha
Helix 47
47
E
163 176Right-handed alpha
Helix 48
48
E
183 185Right-handed 310
Helix 49
49
E
197 216Right-handed alpha
Helix 50
50
F
10 15Right-handed alpha
Helix 51
51
F
33 43Right-handed alpha
Helix 52
52
F
69 82Right-handed alpha
Helix 53
53
F
93 101Right-handed 310
Helix 54
54
F
103 120Right-handed alpha
Helix 55
55
F
147 154Right-handed alpha
Helix 56
56
F
156 162Right-handed alpha
Helix 57
57
F
163 176Right-handed alpha
Helix 58
58
F
183 185Right-handed 310
Helix 59
59
F
197 216Right-handed alpha
Helix 60
60
G
10 15Right-handed alpha
Helix 61
61
G
33 43Right-handed alpha
Helix 62
62
G
69 82Right-handed alpha
Helix 63
63
G
93 101Right-handed 310
Helix 64
64
G
103 120Right-handed alpha
Helix 65
65
G
147 154Right-handed alpha
Helix 66
66
G
156 163Right-handed alpha
Helix 67
67
G
163 176Right-handed alpha
Helix 68
68
G
183 185Right-handed 310
Helix 69
69
G
197 216Right-handed alpha
Helix 70
70
H
10 15Right-handed alpha
Helix 71
71
H
33 43Right-handed alpha
Helix 72
72
H
69 82Right-handed alpha
Helix 73
73
H
93 101Right-handed 310
Helix 74
74
H
103 120Right-handed alpha
Helix 75
75
H
147 154Right-handed alpha
Helix 76
76
H
156 176Right-handed alpha
Helix 77
77
H
183 185Right-handed 310
Helix 78
78
H
197 216Right-handed alpha
Back to top of page

There are 8 sheets in PDB entry 2Q0S. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 52first strand
Strand 2
A
3 9parallel
Strand 3
A
86 90parallel
Strand 4
A
133 138parallel
Strand 5
A
179 181parallel
Back to list of sheets
Back to top of page

There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
46 52first strand
Strand 2
B
3 9parallel
Strand 3
B
86 90parallel
Strand 4
B
133 138parallel
Strand 5
B
179 181parallel
Back to list of sheets
Back to top of page

There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
46 52first strand
Strand 2
C
3 9parallel
Strand 3
C
86 90parallel
Strand 4
C
133 138parallel
Strand 5
C
179 181parallel
Back to list of sheets
Back to top of page

There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
46 52first strand
Strand 2
D
3 9parallel
Strand 3
D
86 90parallel
Strand 4
D
133 138parallel
Strand 5
D
179 181parallel
Back to list of sheets
Back to top of page

There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
46 52first strand
Strand 2
E
3 9parallel
Strand 3
E
86 90parallel
Strand 4
E
133 138parallel
Strand 5
E
179 181parallel
Back to list of sheets
Back to top of page

There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
46 52first strand
Strand 2
F
3 9parallel
Strand 3
F
86 90parallel
Strand 4
F
133 138parallel
Strand 5
F
179 181parallel
Back to list of sheets
Back to top of page

There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
46 52first strand
Strand 2
G
3 9parallel
Strand 3
G
86 90parallel
Strand 4
G
133 138parallel
Strand 5
G
179 181parallel
Back to list of sheets
Back to top of page

There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
46 52first strand
Strand 2
H
3 9parallel
Strand 3
H
86 90parallel
Strand 4
H
133 138parallel
Strand 5
H
179 181parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il