Analysis of interatomic Contacts of Structural Units in PDB entry:
2Q1T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2Q1T entry

There is 1 chain in PDB entry 2Q1T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 6TYR 355
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 2Q1T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
22 35Right-handed alpha
Helix 2
2
A
50 54Right-handed 310
Helix 3
3
A
69 76Right-handed alpha
Helix 4
4
A
91 98Right-handed alpha
Helix 5
5
A
98 107Right-handed alpha
Helix 6
6
A
107 118Right-handed alpha
Helix 7
7
A
159 180Right-handed alpha
Helix 8
8
A
206 210Right-handed 310
Helix 9
9
A
213 224Right-handed alpha
Helix 10
10
A
230 235Right-handed 310
Helix 11
11
A
243 257Right-handed alpha
Helix 12
12
A
273 285Right-handed alpha
Helix 13
13
A
308 316Right-handed alpha
Helix 14
14
A
322 337Right-handed alpha
Helix 15
15
A
337 347Right-handed alpha
Helix 16
16
A
348 355Right-handed alpha
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There are 3 sheets in PDB entry 2Q1T. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 63first strand
Strand 2
A
39 43parallel
Strand 3
A
14 18parallel
Strand 4
A
82 85parallel
Strand 5
A
125 129parallel
Strand 6
A
183 187parallel
Strand 7
A
261 264parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
191 192first strand
Strand 2
A
241 242parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
237 238first strand
Strand 2
A
271 272anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il