Analysis of interatomic Contacts of Structural Units in PDB entry:
2Q5D


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2Q5D entry

There are 4 chains in PDB entry 2Q5D (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ALA 876
C
 PRO 26ARG 64
B
 MET 1ALA 876
D
 GLU 42ARG 64
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are109 helices in PDB entry 2Q5D. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 8Right-handed alpha
Helix 2
2
A
14 32Right-handed alpha
Helix 3
3
A
32 46Right-handed alpha
Helix 4
4
A
50 63Right-handed alpha
Helix 5
5
A
69 82Right-handed alpha
Helix 6
6
A
86 96Right-handed alpha
Helix 7
7
A
108 121Right-handed alpha
Helix 8
8
A
122 124Right-handed 310
Helix 9
9
A
128 139Right-handed alpha
Helix 10
10
A
143 161Right-handed alpha
Helix 11
11
A
166 168Right-handed 310
Helix 12
12
A
169 181Right-handed alpha
Helix 13
13
A
187 200Right-handed alpha
Helix 14
14
A
201 204Right-handed 310
Helix 15
15
A
205 210Right-handed alpha
Helix 16
16
A
211 225Right-handed alpha
Helix 17
17
A
226 228Right-handed 310
Helix 18
18
A
230 248Right-handed alpha
Helix 19
19
A
249 251Right-handed 310
Helix 20
20
A
252 257Right-handed alpha
Helix 21
21
A
259 269Right-handed alpha
Helix 22
22
A
272 290Right-handed alpha
Helix 23
23
A
291 302Right-handed alpha
Helix 24
24
A
313 330Right-handed alpha
Helix 25
25
A
343 360Right-handed alpha
Helix 26
26
A
363 375Right-handed alpha
Helix 27
27
A
379 393Right-handed alpha
Helix 28
28
A
398 408Right-handed alpha
Helix 29
29
A
409 416Right-handed alpha
Helix 30
30
A
417 419Right-handed 310
Helix 31
31
A
421 439Right-handed alpha
Helix 32
32
A
440 443Right-handed 310
Helix 33
33
A
448 460Right-handed alpha
Helix 34
34
A
463 484Right-handed alpha
Helix 35
35
A
502 514Right-handed alpha
Helix 36
36
A
515 522Right-handed 310
Helix 37
37
A
523 538Right-handed alpha
Helix 38
38
A
540 542Right-handed 310
Helix 39
39
A
543 561Right-handed alpha
Helix 40
40
A
563 567Right-handed 310
Helix 41
41
A
570 592Right-handed alpha
Helix 42
42
A
596 618Right-handed alpha
Helix 43
43
A
626 636Right-handed alpha
Helix 44
44
A
639 642Right-handed 310
Helix 45
45
A
643 660Right-handed alpha
Helix 46
46
A
663 681Right-handed alpha
Helix 47
47
A
685 702Right-handed alpha
Helix 48
48
A
709 725Right-handed alpha
Helix 49
49
A
728 744Right-handed alpha
Helix 50
50
A
756 777Right-handed alpha
Helix 51
51
A
785 792Right-handed 310
Helix 52
52
A
793 807Right-handed alpha
Helix 53
53
A
811 830Right-handed alpha
Helix 54
54
A
832 838Right-handed alpha
Helix 55
55
A
840 851Right-handed alpha
Helix 56
56
A
858 864Right-handed alpha
Helix 57
57
A
864 869Right-handed alpha
Helix 58
58
C
39 64Right-handed alpha
Helix 59
59
B
3 8Right-handed alpha
Helix 60
60
B
9 12Right-handed 310
Helix 61
61
B
16 32Right-handed alpha
Helix 62
62
B
32 44Right-handed alpha
Helix 63
63
B
51 66Right-handed alpha
Helix 64
64
B
74 82Right-handed alpha
Helix 65
65
B
84 96Right-handed alpha
Helix 66
66
B
107 121Right-handed alpha
Helix 67
67
B
122 124Right-handed 310
Helix 68
68
B
129 139Right-handed alpha
Helix 69
69
B
143 161Right-handed alpha
Helix 70
70
B
169 182Right-handed alpha
Helix 71
71
B
187 202Right-handed alpha
Helix 72
72
B
205 210Right-handed alpha
Helix 73
73
B
211 226Right-handed alpha
Helix 74
74
B
230 248Right-handed alpha
Helix 75
75
B
252 257Right-handed alpha
Helix 76
76
B
259 269Right-handed alpha
Helix 77
77
B
272 302Right-handed alpha
Helix 78
78
B
313 330Right-handed alpha
Helix 79
79
B
343 359Right-handed alpha
Helix 80
80
B
363 375Right-handed alpha
Helix 81
81
B
379 393Right-handed alpha
Helix 82
82
B
398 408Right-handed alpha
Helix 83
83
B
409 417Right-handed alpha
Helix 84
84
B
421 439Right-handed alpha
Helix 85
85
B
440 443Right-handed 310
Helix 86
86
B
448 460Right-handed alpha
Helix 87
87
B
463 484Right-handed alpha
Helix 88
88
B
502 515Right-handed alpha
Helix 89
89
B
523 538Right-handed alpha
Helix 90
90
B
540 542Right-handed 310
Helix 91
91
B
543 564Right-handed alpha
Helix 92
92
B
572 574Right-handed 310
Helix 93
93
B
575 593Right-handed alpha
Helix 94
94
B
596 617Right-handed alpha
Helix 95
95
B
628 637Right-handed alpha
Helix 96
96
B
651 655Right-handed 310
Helix 97
97
B
665 678Right-handed alpha
Helix 98
98
B
685 687Right-handed 310
Helix 99
99
B
688 700Right-handed alpha
Helix 100
100
B
708 722Right-handed alpha
Helix 101
101
B
731 745Right-handed alpha
Helix 102
102
B
760 774Right-handed alpha
Helix 103
103
B
790 792Right-handed 310
Helix 104
104
B
793 805Right-handed alpha
Helix 105
105
B
811 819Right-handed alpha
Helix 106
106
B
830 839Right-handed alpha
Helix 107
107
B
845 850Right-handed alpha
Helix 108
108
B
859 871Right-handed alpha
Helix 109
109
D
42 64Right-handed alpha
Back to top of page
There are no sheets in PDB entry 2Q5D
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il