Analysis of interatomic Contacts of Structural Units in PDB entry:
2Q60


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2Q60 entry

There are 4 chains in PDB entry 2Q60 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 103LYS 324
B
 ASP 106PHE 325
C
 ASN 105LEU 326
D
 ASN 103ASP 323
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 48 helices in PDB entry 2Q60. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
110 118Right-handed alpha
Helix 2
2
A
153 161Right-handed alpha
Helix 3
3
A
168 192Right-handed alpha
Helix 4
4
A
208 216Right-handed alpha
Helix 5
5
A
217 228Right-handed alpha
Helix 6
6
A
228 236Right-handed alpha
Helix 7
7
A
238 251Right-handed alpha
Helix 8
8
A
260 279Right-handed alpha
Helix 9
9
A
286 288Right-handed 310
Helix 10
10
A
289 294Right-handed alpha
Helix 11
11
A
296 309Right-handed alpha
Helix 12
12
A
309 316Right-handed alpha
Helix 13
13
B
109 119Right-handed alpha
Helix 14
14
B
144 146Right-handed 310
Helix 15
15
B
147 160Right-handed alpha
Helix 16
16
B
168 192Right-handed alpha
Helix 17
17
B
209 213Right-handed alpha
Helix 18
18
B
217 228Right-handed alpha
Helix 19
19
B
228 235Right-handed alpha
Helix 20
20
B
238 251Right-handed alpha
Helix 21
21
B
260 283Right-handed alpha
Helix 22
22
B
286 289Right-handed 310
Helix 23
23
B
290 295Right-handed alpha
Helix 24
24
B
296 311Right-handed alpha
Helix 25
25
B
311 318Right-handed alpha
Helix 26
26
C
109 120Right-handed alpha
Helix 27
27
C
147 161Right-handed alpha
Helix 28
28
C
173 191Right-handed alpha
Helix 29
29
C
208 213Right-handed alpha
Helix 30
30
C
217 226Right-handed alpha
Helix 31
31
C
228 234Right-handed alpha
Helix 32
32
C
238 251Right-handed alpha
Helix 33
33
C
261 281Right-handed alpha
Helix 34
34
C
288 295Right-handed alpha
Helix 35
35
C
296 311Right-handed alpha
Helix 36
36
C
311 319Right-handed alpha
Helix 37
37
D
109 120Right-handed alpha
Helix 38
38
D
153 161Right-handed alpha
Helix 39
39
D
168 192Right-handed alpha
Helix 40
40
D
193 195Right-handed 310
Helix 41
41
D
209 215Right-handed alpha
Helix 42
42
D
217 228Right-handed alpha
Helix 43
43
D
228 235Right-handed alpha
Helix 44
44
D
238 251Right-handed alpha
Helix 45
45
D
262 283Right-handed alpha
Helix 46
46
D
288 295Right-handed alpha
Helix 47
47
D
296 307Right-handed alpha
Helix 48
48
D
309 316Right-handed alpha
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There are 2 sheets in PDB entry 2Q60. Click on sheet of interest to get list of strands forming it: A, B,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
198 200first strand
Strand 2
B
206 208anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
198 199first strand
Strand 2
D
207 208anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il