Analysis of interatomic Contacts of Structural Units in PDB entry:
2Q6T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2Q6T entry

There are 4 chains in PDB entry 2Q6T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 5LEU 440
B
 GLU 2LEU 440
C
 PRO 4LEU 440
D
 PRO 4LEU 440
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 85 helices in PDB entry 2Q6T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 23Right-handed alpha
Helix 2
2
A
26 34Right-handed alpha
Helix 3
3
A
36 40Right-handed 310
Helix 4
4
A
42 58Right-handed alpha
Helix 5
5
A
63 75Right-handed alpha
Helix 6
6
A
81 92Right-handed alpha
Helix 7
7
A
98 129Right-handed alpha
Helix 8
8
A
132 150Right-handed alpha
Helix 9
9
A
159 170Right-handed alpha
Helix 10
10
A
187 195Right-handed alpha
Helix 11
11
A
212 227Right-handed alpha
Helix 12
12
A
240 253Right-handed alpha
Helix 13
13
A
261 265Right-handed 310
Helix 14
14
A
266 282Right-handed alpha
Helix 15
15
A
294 309Right-handed alpha
Helix 16
16
A
318 322Right-handed 310
Helix 17
17
A
333 353Right-handed alpha
Helix 18
18
A
363 368Right-handed 310
Helix 19
19
A
375 383Right-handed 310
Helix 20
20
A
385 389Right-handed 310
Helix 21
21
A
399 401Right-handed 310
Helix 22
22
B
9 23Right-handed alpha
Helix 23
23
B
26 34Right-handed alpha
Helix 24
24
B
36 40Right-handed 310
Helix 25
25
B
42 58Right-handed alpha
Helix 26
26
B
63 74Right-handed alpha
Helix 27
27
B
76 81Right-handed alpha
Helix 28
28
B
81 91Right-handed alpha
Helix 29
29
B
98 129Right-handed alpha
Helix 30
30
B
132 148Right-handed alpha
Helix 31
31
B
158 173Right-handed alpha
Helix 32
32
B
187 195Right-handed alpha
Helix 33
33
B
212 228Right-handed alpha
Helix 34
34
B
240 253Right-handed alpha
Helix 35
35
B
256 260Right-handed 310
Helix 36
36
B
266 281Right-handed alpha
Helix 37
37
B
294 310Right-handed alpha
Helix 38
38
B
318 322Right-handed 310
Helix 39
39
B
333 353Right-handed alpha
Helix 40
40
B
363 368Right-handed 310
Helix 41
41
B
375 383Right-handed 310
Helix 42
42
B
384 389Right-handed alpha
Helix 43
43
B
397 402Right-handed alpha
Helix 44
44
C
9 23Right-handed alpha
Helix 45
45
C
26 34Right-handed alpha
Helix 46
46
C
36 40Right-handed 310
Helix 47
47
C
42 58Right-handed alpha
Helix 48
48
C
63 74Right-handed alpha
Helix 49
49
C
76 81Right-handed alpha
Helix 50
50
C
81 91Right-handed alpha
Helix 51
51
C
98 128Right-handed alpha
Helix 52
52
C
132 149Right-handed alpha
Helix 53
53
C
158 170Right-handed alpha
Helix 54
54
C
187 195Right-handed alpha
Helix 55
55
C
212 226Right-handed alpha
Helix 56
56
C
240 253Right-handed alpha
Helix 57
57
C
270 281Right-handed alpha
Helix 58
58
C
294 304Right-handed alpha
Helix 59
59
C
304 309Right-handed alpha
Helix 60
60
C
318 322Right-handed 310
Helix 61
61
C
333 353Right-handed alpha
Helix 62
62
C
365 369Right-handed 310
Helix 63
63
C
375 383Right-handed 310
Helix 64
64
C
398 402Right-handed alpha
Helix 65
65
D
9 23Right-handed alpha
Helix 66
66
D
26 32Right-handed alpha
Helix 67
67
D
36 40Right-handed 310
Helix 68
68
D
42 59Right-handed alpha
Helix 69
69
D
63 74Right-handed alpha
Helix 70
70
D
76 81Right-handed alpha
Helix 71
71
D
81 91Right-handed alpha
Helix 72
72
D
98 129Right-handed alpha
Helix 73
73
D
132 146Right-handed alpha
Helix 74
74
D
159 173Right-handed alpha
Helix 75
75
D
187 195Right-handed alpha
Helix 76
76
D
212 227Right-handed alpha
Helix 77
77
D
240 254Right-handed alpha
Helix 78
78
D
272 281Right-handed alpha
Helix 79
79
D
294 310Right-handed alpha
Helix 80
80
D
318 322Right-handed 310
Helix 81
81
D
333 353Right-handed alpha
Helix 82
82
D
363 369Right-handed 310
Helix 83
83
D
375 380Right-handed 310
Helix 84
84
D
385 389Right-handed 310
Helix 85
85
D
397 401Right-handed 310
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There are 4 sheets in PDB entry 2Q6T. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
157 158first strand
Strand 2
B
285 288anti-parallel
Strand 3
B
231 236parallel
Strand 4
B
311 317parallel
Strand 5
B
356 361parallel
Strand 6
B
202 207parallel
Strand 7
B
391 396parallel
Strand 8
B
410 417anti-parallel
Strand 9
B
424 431anti-parallel
Strand 10
B
436 438anti-parallel
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There are 10 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
436 438first strand
Strand 2
A
424 431anti-parallel
Strand 3
A
410 417anti-parallel
Strand 4
A
391 397anti-parallel
Strand 5
A
202 207parallel
Strand 6
A
356 361parallel
Strand 7
A
313 317parallel
Strand 8
A
232 236parallel
Strand 9
A
285 288parallel
Strand 10
D
157 158anti-parallel
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There are 9 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
285 288first strand
Strand 2
C
231 236parallel
Strand 3
C
311 317parallel
Strand 4
C
356 361parallel
Strand 5
C
202 207parallel
Strand 6
C
391 397parallel
Strand 7
C
410 417anti-parallel
Strand 8
C
424 431anti-parallel
Strand 9
C
436 438anti-parallel
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There are 9 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
285 288first strand
Strand 2
D
232 236parallel
Strand 3
D
314 317parallel
Strand 4
D
356 361parallel
Strand 5
D
202 207parallel
Strand 6
D
391 396parallel
Strand 7
D
410 417anti-parallel
Strand 8
D
424 431anti-parallel
Strand 9
D
436 438anti-parallel
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