Analysis of interatomic Contacts of Structural Units in PDB entry:
2Q7A


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2Q7A entry

There are 2 chains in PDB entry 2Q7A (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 29THR 180
B
 MET 29THR 180
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 2Q7A. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
56 58Right-handed 310
Helix 2
2
A
59 71Right-handed alpha
Helix 3
3
A
93 95Right-handed 310
Helix 4
4
B
56 58Right-handed 310
Helix 5
5
B
59 71Right-handed alpha
Helix 6
6
B
93 95Right-handed 310
Helix 7
7
B
106 109Right-handed 310
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There are 3 sheets in PDB entry 2Q7A. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
113 115first strand
Strand 2
A
97 106anti-parallel
Strand 3
A
142 150anti-parallel
Strand 4
A
155 167anti-parallel
Strand 5
A
32 42anti-parallel
Strand 6
A
74 80anti-parallel
Strand 7
A
85 91anti-parallel
Strand 8
A
128 137anti-parallel
Strand 9
A
118 125anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
118 125first strand
Strand 2
B
128 137anti-parallel
Strand 3
B
85 91anti-parallel
Strand 4
B
74 80anti-parallel
Strand 5
B
32 38anti-parallel
Strand 6
B
168 169anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
40 42first strand
Strand 2
B
155 162anti-parallel
Strand 3
B
143 150anti-parallel
Strand 4
B
97 105anti-parallel
Strand 5
B
113 115anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il