Analysis of interatomic Contacts of Structural Units in PDB entry:
2Q80


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2Q80 entry

There are 6 chains in PDB entry 2Q80 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 6LYS 296
B
 GLU 6PHE 295
C
 GLU 6PHE 295
D
 GLU 6PHE 295
E
 GLU 6PHE 295
F
 GLU 6PHE 295
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 93 helices in PDB entry 2Q80. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
7 13Right-handed alpha
Helix 2
2
A
13 20Right-handed alpha
Helix 3
3
A
24 40Right-handed alpha
Helix 4
4
A
42 69Right-handed alpha
Helix 5
5
A
78 84Right-handed alpha
Helix 6
6
A
84 105Right-handed alpha
Helix 7
7
A
110 135Right-handed alpha
Helix 8
8
A
140 166Right-handed alpha
Helix 9
9
A
173 195Right-handed alpha
Helix 10
10
A
205 211Right-handed alpha
Helix 11
11
A
214 224Right-handed alpha
Helix 12
12
A
228 236Right-handed alpha
Helix 13
13
A
240 254Right-handed alpha
Helix 14
14
A
255 278Right-handed alpha
Helix 15
15
A
281 293Right-handed alpha
Helix 16
16
B
7 13Right-handed alpha
Helix 17
17
B
13 20Right-handed alpha
Helix 18
18
B
24 40Right-handed alpha
Helix 19
19
B
42 69Right-handed alpha
Helix 20
20
B
78 84Right-handed alpha
Helix 21
21
B
84 105Right-handed alpha
Helix 22
22
B
110 136Right-handed alpha
Helix 23
23
B
140 166Right-handed alpha
Helix 24
24
B
173 195Right-handed alpha
Helix 25
25
B
205 211Right-handed alpha
Helix 26
26
B
214 224Right-handed alpha
Helix 27
27
B
228 236Right-handed alpha
Helix 28
28
B
240 254Right-handed alpha
Helix 29
29
B
255 277Right-handed alpha
Helix 30
30
B
281 293Right-handed alpha
Helix 31
31
C
7 13Right-handed alpha
Helix 32
32
C
13 20Right-handed alpha
Helix 33
33
C
24 40Right-handed alpha
Helix 34
34
C
42 69Right-handed alpha
Helix 35
35
C
78 84Right-handed alpha
Helix 36
36
C
84 104Right-handed alpha
Helix 37
37
C
105 107Right-handed 310
Helix 38
38
C
110 135Right-handed alpha
Helix 39
39
C
140 166Right-handed alpha
Helix 40
40
C
173 195Right-handed alpha
Helix 41
41
C
205 211Right-handed alpha
Helix 42
42
C
214 224Right-handed alpha
Helix 43
43
C
228 236Right-handed alpha
Helix 44
44
C
240 254Right-handed alpha
Helix 45
45
C
255 279Right-handed alpha
Helix 46
46
C
281 293Right-handed alpha
Helix 47
47
C
294 295Right-handed 310
Helix 48
48
D
6 6Right-handed 310
Helix 49
49
D
7 20Right-handed alpha
Helix 50
50
D
24 40Right-handed alpha
Helix 51
51
D
42 68Right-handed alpha
Helix 52
52
D
78 84Right-handed alpha
Helix 53
53
D
84 104Right-handed alpha
Helix 54
54
D
105 107Right-handed 310
Helix 55
55
D
110 135Right-handed alpha
Helix 56
56
D
140 166Right-handed alpha
Helix 57
57
D
173 195Right-handed alpha
Helix 58
58
D
205 211Right-handed alpha
Helix 59
59
D
214 224Right-handed alpha
Helix 60
60
D
228 236Right-handed alpha
Helix 61
61
D
240 254Right-handed alpha
Helix 62
62
D
255 278Right-handed alpha
Helix 63
63
D
281 293Right-handed alpha
Helix 64
64
E
7 20Right-handed alpha
Helix 65
65
E
24 40Right-handed alpha
Helix 66
66
E
42 68Right-handed alpha
Helix 67
67
E
78 84Right-handed alpha
Helix 68
68
E
84 104Right-handed alpha
Helix 69
69
E
105 107Right-handed 310
Helix 70
70
E
110 136Right-handed alpha
Helix 71
71
E
140 166Right-handed alpha
Helix 72
72
E
173 195Right-handed alpha
Helix 73
73
E
205 211Right-handed alpha
Helix 74
74
E
214 224Right-handed alpha
Helix 75
75
E
228 237Right-handed alpha
Helix 76
76
E
240 255Right-handed alpha
Helix 77
77
E
255 278Right-handed alpha
Helix 78
78
E
281 293Right-handed alpha
Helix 79
79
F
7 13Right-handed alpha
Helix 80
80
F
13 20Right-handed alpha
Helix 81
81
F
24 40Right-handed alpha
Helix 82
82
F
42 68Right-handed alpha
Helix 83
83
F
78 84Right-handed alpha
Helix 84
84
F
84 105Right-handed alpha
Helix 85
85
F
110 135Right-handed alpha
Helix 86
86
F
140 166Right-handed alpha
Helix 87
87
F
173 195Right-handed alpha
Helix 88
88
F
205 211Right-handed alpha
Helix 89
89
F
214 224Right-handed alpha
Helix 90
90
F
228 237Right-handed alpha
Helix 91
91
F
240 254Right-handed alpha
Helix 92
92
F
255 278Right-handed alpha
Helix 93
93
F
281 293Right-handed alpha
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There are 6 sheets in PDB entry 2Q80. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
72 73first strand
Strand 2
A
76 77anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
72 73first strand
Strand 2
B
76 77anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
72 73first strand
Strand 2
C
76 77anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
72 73first strand
Strand 2
D
76 77anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
72 73first strand
Strand 2
E
76 77anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
72 73first strand
Strand 2
F
76 77anti-parallel
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