Analysis of interatomic Contacts of Structural Units in PDB entry:
2QC9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2QC9 entry

There are 4 chains in PDB entry 2QC9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 1914ALA 1944
A
 ILE 1946TYR 2106
B
 LEU 1910ALA 1944
B
 ILE 1946TYR 2106
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 2QC9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1920 1928Right-handed alpha
Helix 2
2
A
1930 1940Right-handed alpha
Helix 3
3
A
1953 1962Right-handed alpha
Helix 4
4
A
1963 1973Right-handed alpha
Helix 5
5
A
1987 1995Right-handed alpha
Helix 6
6
A
1997 2007Right-handed alpha
Helix 7
7
A
2020 2028Right-handed alpha
Helix 8
8
A
2030 2040Right-handed alpha
Helix 9
9
A
2053 2062Right-handed alpha
Helix 10
10
A
2063 2073Right-handed alpha
Helix 11
11
A
2086 2093Right-handed alpha
Helix 12
12
A
2096 2105Right-handed alpha
Helix 13
13
B
1920 1928Right-handed alpha
Helix 14
14
B
1930 1939Right-handed alpha
Helix 15
15
B
1953 1961Right-handed alpha
Helix 16
16
B
1963 1973Right-handed alpha
Helix 17
17
B
1987 1996Right-handed alpha
Helix 18
18
B
1997 2007Right-handed alpha
Helix 19
19
B
2020 2028Right-handed alpha
Helix 20
20
B
2030 2040Right-handed alpha
Helix 21
21
B
2053 2062Right-handed alpha
Helix 22
22
B
2063 2072Right-handed alpha
Helix 23
23
B
2086 2092Right-handed alpha
Helix 24
24
B
2096 2104Right-handed alpha
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There are no sheets in PDB entry 2QC9
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il