Analysis of interatomic Contacts of Structural Units in PDB entry:
2QFC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2QFC entry

There are 4 chains in PDB entry 2QFC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 3LEU 286
B
 ALA 3LEU 286
C
 LEU 44PHE 48
D
 LEU 44PHE 48
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 2QFC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
3 18Right-handed alpha
Helix 2
2
A
30 39Right-handed alpha
Helix 3
3
A
45 53Right-handed alpha
Helix 4
4
A
60 88Right-handed alpha
Helix 5
5
A
90 104Right-handed alpha
Helix 6
6
A
108 126Right-handed alpha
Helix 7
7
A
130 143Right-handed alpha
Helix 8
8
A
152 168Right-handed alpha
Helix 9
9
A
170 188Right-handed alpha
Helix 10
10
A
191 209Right-handed alpha
Helix 11
11
A
211 229Right-handed alpha
Helix 12
12
A
234 249Right-handed alpha
Helix 13
13
A
252 270Right-handed alpha
Helix 14
14
A
272 286Right-handed alpha
Helix 15
15
B
4 16Right-handed alpha
Helix 16
16
B
30 40Right-handed alpha
Helix 17
17
B
45 57Right-handed alpha
Helix 18
18
B
59 88Right-handed alpha
Helix 19
19
B
90 103Right-handed alpha
Helix 20
20
B
108 126Right-handed alpha
Helix 21
21
B
130 143Right-handed alpha
Helix 22
22
B
152 168Right-handed alpha
Helix 23
23
B
170 189Right-handed alpha
Helix 24
24
B
191 209Right-handed alpha
Helix 25
25
B
211 229Right-handed alpha
Helix 26
26
B
234 249Right-handed alpha
Helix 27
27
B
252 270Right-handed alpha
Helix 28
28
B
272 286Right-handed alpha
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There are no sheets in PDB entry 2QFC
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il