Analysis of interatomic Contacts of Structural Units in PDB entry:
2QFI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2QFI entry

There are 2 chains in PDB entry 2QFI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 5VAL 290
B
 TYR 5VAL 290
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 2QFI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
13 18Right-handed alpha
Helix 2
2
A
46 61Right-handed alpha
Helix 3
3
A
77 85Right-handed alpha
Helix 4
4
A
95 99Right-handed 310
Helix 5
5
A
121 125Right-handed 310
Helix 6
6
A
127 132Right-handed 310
Helix 7
7
A
134 139Right-handed alpha
Helix 8
8
A
140 142Right-handed 310
Helix 9
9
A
147 152Right-handed 310
Helix 10
10
A
153 158Right-handed alpha
Helix 11
11
A
182 187Right-handed alpha
Helix 12
12
A
196 201Right-handed alpha
Helix 13
13
A
202 205Right-handed 310
Helix 14
14
A
213 223Right-handed alpha
Helix 15
15
A
257 259Right-handed 310
Helix 16
16
A
260 271Right-handed alpha
Helix 17
17
B
13 18Right-handed alpha
Helix 18
18
B
46 61Right-handed alpha
Helix 19
19
B
77 85Right-handed alpha
Helix 20
20
B
95 99Right-handed 310
Helix 21
21
B
121 125Right-handed 310
Helix 22
22
B
127 132Right-handed 310
Helix 23
23
B
134 139Right-handed alpha
Helix 24
24
B
140 142Right-handed 310
Helix 25
25
B
147 152Right-handed 310
Helix 26
26
B
153 158Right-handed alpha
Helix 27
27
B
182 190Right-handed alpha
Helix 28
28
B
196 201Right-handed alpha
Helix 29
29
B
202 205Right-handed 310
Helix 30
30
B
213 223Right-handed alpha
Helix 31
31
B
257 260Right-handed 310
Helix 32
32
B
261 271Right-handed alpha
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There are no sheets in PDB entry 2QFI
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