Analysis of interatomic Contacts of Structural Units in PDB entry:
2QG7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2QG7 entry

There are 4 chains in PDB entry 2QG7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 50VAL 458
B
 GLU 54VAL 458
D
 TYR 50VAL 458
E
 TYR 50VAL 458
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 74 helices in PDB entry 2QG7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
64 76Right-handed alpha
Helix 2
2
A
83 98Right-handed alpha
Helix 3
3
A
104 108Right-handed 310
Helix 4
4
A
150 162Right-handed alpha
Helix 5
5
A
195 211Right-handed alpha
Helix 6
6
A
215 227Right-handed alpha
Helix 7
7
A
235 253Right-handed alpha
Helix 8
8
A
261 267Right-handed alpha
Helix 9
9
A
268 285Right-handed alpha
Helix 10
10
A
298 300Right-handed 310
Helix 11
11
A
360 370Right-handed alpha
Helix 12
12
A
371 373Right-handed 310
Helix 13
13
A
377 381Right-handed 310
Helix 14
14
A
383 396Right-handed alpha
Helix 15
15
A
399 411Right-handed alpha
Helix 16
16
A
412 429Right-handed alpha
Helix 17
17
A
437 449Right-handed alpha
Helix 18
18
A
451 456Right-handed alpha
Helix 19
19
A
457 458Right-handed 310
Helix 20
20
B
54 58Right-handed 310
Helix 21
21
B
68 76Right-handed alpha
Helix 22
22
B
83 98Right-handed alpha
Helix 23
23
B
104 109Right-handed 310
Helix 24
24
B
150 164Right-handed alpha
Helix 25
25
B
189 195Right-handed alpha
Helix 26
26
B
195 211Right-handed alpha
Helix 27
27
B
215 227Right-handed alpha
Helix 28
28
B
235 253Right-handed alpha
Helix 29
29
B
259 263Right-handed 310
Helix 30
30
B
268 285Right-handed alpha
Helix 31
31
B
298 300Right-handed 310
Helix 32
32
B
360 370Right-handed alpha
Helix 33
33
B
371 373Right-handed 310
Helix 34
34
B
377 381Right-handed 310
Helix 35
35
B
383 396Right-handed alpha
Helix 36
36
B
399 411Right-handed alpha
Helix 37
37
B
412 432Right-handed alpha
Helix 38
38
B
437 449Right-handed alpha
Helix 39
39
B
451 456Right-handed alpha
Helix 40
40
D
66 76Right-handed alpha
Helix 41
41
D
83 98Right-handed alpha
Helix 42
42
D
106 110Right-handed 310
Helix 43
43
D
153 164Right-handed alpha
Helix 44
44
D
189 195Right-handed alpha
Helix 45
45
D
195 212Right-handed alpha
Helix 46
46
D
215 226Right-handed alpha
Helix 47
47
D
235 253Right-handed alpha
Helix 48
48
D
261 266Right-handed alpha
Helix 49
49
D
268 285Right-handed alpha
Helix 50
50
D
298 300Right-handed 310
Helix 51
51
D
360 370Right-handed alpha
Helix 52
52
D
377 381Right-handed 310
Helix 53
53
D
383 396Right-handed alpha
Helix 54
54
D
399 411Right-handed alpha
Helix 55
55
D
412 431Right-handed alpha
Helix 56
56
D
437 449Right-handed alpha
Helix 57
57
D
451 456Right-handed alpha
Helix 58
58
E
64 76Right-handed alpha
Helix 59
59
E
83 98Right-handed alpha
Helix 60
60
E
150 164Right-handed alpha
Helix 61
61
E
189 195Right-handed alpha
Helix 62
62
E
195 211Right-handed alpha
Helix 63
63
E
215 227Right-handed alpha
Helix 64
64
E
235 252Right-handed alpha
Helix 65
65
E
261 266Right-handed alpha
Helix 66
66
E
268 285Right-handed alpha
Helix 67
67
E
298 300Right-handed 310
Helix 68
68
E
360 370Right-handed alpha
Helix 69
69
E
377 381Right-handed 310
Helix 70
70
E
383 396Right-handed alpha
Helix 71
71
E
399 411Right-handed alpha
Helix 72
72
E
412 431Right-handed alpha
Helix 73
73
E
437 449Right-handed alpha
Helix 74
74
E
451 456Right-handed alpha
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There are 12 sheets in PDB entry 2QG7. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
111 116first strand
Strand 2
A
122 129anti-parallel
Strand 3
A
134 141anti-parallel
Strand 4
A
177 181anti-parallel
Strand 5
A
170 174anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
186 187first strand
Strand 2
A
302 304anti-parallel
Strand 3
A
347 349anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
290 293first strand
Strand 2
A
356 359anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
111 116first strand
Strand 2
B
123 129anti-parallel
Strand 3
B
134 140anti-parallel
Strand 4
B
177 181anti-parallel
Strand 5
B
170 174anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
186 187first strand
Strand 2
B
302 304anti-parallel
Strand 3
B
347 349anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
290 293first strand
Strand 2
B
356 359anti-parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
112 116first strand
Strand 2
D
122 128anti-parallel
Strand 3
D
135 141anti-parallel
Strand 4
D
177 181anti-parallel
Strand 5
D
170 174anti-parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
186 187first strand
Strand 2
D
302 304anti-parallel
Strand 3
D
347 349anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
290 293first strand
Strand 2
D
356 359anti-parallel
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There are 5 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
112 116first strand
Strand 2
E
122 128anti-parallel
Strand 3
E
136 141anti-parallel
Strand 4
E
177 181anti-parallel
Strand 5
E
170 174anti-parallel
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There are 3 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
186 187first strand
Strand 2
E
302 304anti-parallel
Strand 3
E
347 349anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
290 293first strand
Strand 2
E
356 359anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il