Analysis of interatomic Contacts of Structural Units in PDB entry:
2QGS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2QGS entry

There are 2 chains in PDB entry 2QGS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1LYS 216
B
 MSE 1GLU 217
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 2QGS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 18Right-handed alpha
Helix 2
2
A
24 44Right-handed alpha
Helix 3
3
A
49 59Right-handed alpha
Helix 4
4
A
68 82Right-handed alpha
Helix 5
5
A
86 99Right-handed alpha
Helix 6
6
A
113 126Right-handed alpha
Helix 7
7
A
128 144Right-handed alpha
Helix 8
8
A
154 159Right-handed alpha
Helix 9
9
A
160 166Right-handed 310
Helix 10
10
A
169 177Right-handed alpha
Helix 11
11
A
178 185Right-handed 310
Helix 12
12
A
187 213Right-handed alpha
Helix 13
13
B
2 18Right-handed alpha
Helix 14
14
B
24 44Right-handed alpha
Helix 15
15
B
49 59Right-handed alpha
Helix 16
16
B
73 81Right-handed alpha
Helix 17
17
B
86 100Right-handed alpha
Helix 18
18
B
113 126Right-handed alpha
Helix 19
19
B
128 144Right-handed alpha
Helix 20
20
B
156 166Right-handed 310
Helix 21
21
B
169 177Right-handed alpha
Helix 22
22
B
178 185Right-handed 310
Helix 23
23
B
187 213Right-handed alpha
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There are no sheets in PDB entry 2QGS
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il