Analysis of interatomic Contacts of Structural Units in PDB entry:
2QJ0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2QJ0 entry

There is 1 chain in PDB entry 2QJ0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY -5LYS 951
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 46 helices in PDB entry 2QJ0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
-3 9Right-handed alpha
Helix 2
2
A
38 49Right-handed alpha
Helix 3
3
A
55 75Right-handed alpha
Helix 4
4
A
81 102Right-handed alpha
Helix 5
5
A
112 123Right-handed alpha
Helix 6
6
A
124 126Right-handed 310
Helix 7
7
A
127 141Right-handed alpha
Helix 8
8
A
144 162Right-handed alpha
Helix 9
9
A
170 186Right-handed alpha
Helix 10
10
A
187 195Right-handed alpha
Helix 11
11
A
217 222Right-handed alpha
Helix 12
12
A
227 235Right-handed alpha
Helix 13
13
A
242 275Right-handed alpha
Helix 14
14
A
275 292Right-handed alpha
Helix 15
15
A
293 298Right-handed 310
Helix 16
16
A
302 306Right-handed 310
Helix 17
17
A
308 324Right-handed alpha
Helix 18
18
A
338 344Right-handed 310
Helix 19
19
A
360 370Right-handed alpha
Helix 20
20
A
380 396Right-handed alpha
Helix 21
21
A
396 406Right-handed alpha
Helix 22
22
A
406 422Right-handed alpha
Helix 23
23
A
428 461Right-handed alpha
Helix 24
24
A
462 485Right-handed alpha
Helix 25
25
A
510 518Right-handed alpha
Helix 26
26
A
522 527Right-handed 310
Helix 27
27
A
528 542Right-handed alpha
Helix 28
28
A
554 568Right-handed alpha
Helix 29
29
A
574 588Right-handed alpha
Helix 30
30
A
600 607Right-handed alpha
Helix 31
31
A
607 625Right-handed alpha
Helix 32
32
A
635 655Right-handed alpha
Helix 33
33
A
655 669Right-handed alpha
Helix 34
34
A
669 704Right-handed alpha
Helix 35
35
A
719 755Right-handed alpha
Helix 36
36
A
756 760Right-handed 310
Helix 37
37
A
761 781Right-handed alpha
Helix 38
38
A
781 786Right-handed alpha
Helix 39
39
A
791 796Right-handed 310
Helix 40
40
A
798 814Right-handed alpha
Helix 41
41
A
816 826Right-handed alpha
Helix 42
42
A
831 841Right-handed alpha
Helix 43
43
A
851 879Right-handed alpha
Helix 44
44
A
882 886Right-handed 310
Helix 45
45
A
909 917Right-handed alpha
Helix 46
46
A
937 947Right-handed alpha
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There are 2 sheets in PDB entry 2QJ0. Click on sheet of interest to get list of strands forming it: A, B,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 11first strand
Strand 2
A
21 22parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
906 908first strand
Strand 2
A
897 899anti-parallel
Strand 3
A
935 936anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il