Analysis of interatomic Contacts of Structural Units in PDB entry:
2QLV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2QLV entry

There are 6 chains in PDB entry 2QLV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 460SER 630
B
 SER 161ILE 412
C
 SER 7SER 321
D
 TYR 460SER 630
E
 SER 161ILE 412
F
 SER 7SER 321
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 46 helices in PDB entry 2QLV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
471 473Right-handed 310
Helix 2
2
A
474 485Right-handed alpha
Helix 3
3
A
488 492Right-handed 310
Helix 4
4
A
514 529Right-handed alpha
Helix 5
5
A
606 611Right-handed alpha
Helix 6
6
A
612 630Right-handed alpha
Helix 7
7
B
183 185Right-handed 310
Helix 8
8
B
310 314Right-handed 310
Helix 9
9
B
315 327Right-handed alpha
Helix 10
10
C
7 27Right-handed alpha
Helix 11
11
C
30 35Right-handed alpha
Helix 12
12
C
49 60Right-handed alpha
Helix 13
13
C
80 94Right-handed alpha
Helix 14
14
C
97 103Right-handed alpha
Helix 15
15
C
105 114Right-handed alpha
Helix 16
16
C
131 140Right-handed alpha
Helix 17
17
C
167 178Right-handed alpha
Helix 18
18
C
179 182Right-handed 310
Helix 19
19
C
207 218Right-handed alpha
Helix 20
20
C
239 245Right-handed alpha
Helix 21
21
C
251 255Right-handed 310
Helix 22
22
C
256 261Right-handed alpha
Helix 23
23
C
262 264Right-handed 310
Helix 24
24
C
279 290Right-handed alpha
Helix 25
25
C
310 320Right-handed alpha
Helix 26
26
D
471 473Right-handed 310
Helix 27
27
D
474 485Right-handed alpha
Helix 28
28
D
517 529Right-handed alpha
Helix 29
29
D
611 630Right-handed alpha
Helix 30
30
E
183 185Right-handed 310
Helix 31
31
F
9 28Right-handed alpha
Helix 32
32
F
29 35Right-handed 310
Helix 33
33
F
49 60Right-handed alpha
Helix 34
34
F
80 94Right-handed alpha
Helix 35
35
F
97 103Right-handed alpha
Helix 36
36
F
108 116Right-handed alpha
Helix 37
37
F
131 140Right-handed alpha
Helix 38
38
F
167 178Right-handed alpha
Helix 39
39
F
179 184Right-handed 310
Helix 40
40
F
187 191Right-handed 310
Helix 41
41
F
207 218Right-handed alpha
Helix 42
42
F
239 246Right-handed alpha
Helix 43
43
F
250 255Right-handed 310
Helix 44
44
F
256 261Right-handed alpha
Helix 45
45
F
279 290Right-handed alpha
Helix 46
46
F
310 320Right-handed alpha
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There are 17 sheets in PDB entry 2QLV. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
468 469first strand
Strand 2
C
272 274anti-parallel
Strand 3
C
294 298parallel
Strand 4
C
304 309anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
506 507first strand
Strand 2
B
382 383anti-parallel
Strand 3
B
390 399anti-parallel
Strand 4
B
402 411anti-parallel
Strand 5
C
38 45parallel
Strand 6
C
65 69parallel
Strand 7
C
74 79anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
509 511first strand
Strand 2
A
580 590anti-parallel
Strand 3
A
565 573anti-parallel
Strand 4
A
543 548anti-parallel
Strand 5
A
532 533anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
164 170first strand
Strand 2
B
202 208anti-parallel
Strand 3
B
193 194anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
190 191first strand
Strand 2
B
177 181anti-parallel
Strand 3
B
211 219anti-parallel
Strand 4
B
222 224anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
190 191first strand
Strand 2
B
177 181anti-parallel
Strand 3
B
211 219anti-parallel
Strand 4
B
240 245anti-parallel
Strand 5
B
231 232anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
146 150first strand
Strand 2
C
161 166anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
222 225first strand
Strand 2
C
234 237anti-parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
468 469first strand
Strand 2
F
272 274anti-parallel
Strand 3
F
294 298parallel
Strand 4
F
304 309anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
505 507first strand
Strand 2
E
382 384anti-parallel
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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
509 511first strand
Strand 2
D
580 589anti-parallel
Strand 3
D
566 573anti-parallel
Strand 4
D
543 546anti-parallel
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There are 3 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
164 170first strand
Strand 2
E
202 208anti-parallel
Strand 3
E
193 194anti-parallel
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There are 4 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
190 191first strand
Strand 2
E
177 181anti-parallel
Strand 3
E
211 219anti-parallel
Strand 4
E
222 224anti-parallel
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There are 5 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
190 191first strand
Strand 2
E
177 181anti-parallel
Strand 3
E
211 219anti-parallel
Strand 4
E
239 245anti-parallel
Strand 5
E
231 233anti-parallel
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There are 5 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
390 399first strand
Strand 2
E
402 411anti-parallel
Strand 3
F
38 45parallel
Strand 4
F
65 69parallel
Strand 5
F
74 79anti-parallel
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There are 2 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
146 151first strand
Strand 2
F
160 166anti-parallel
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There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
222 226first strand
Strand 2
F
232 237anti-parallel
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