Analysis of interatomic Contacts of Structural Units in PDB entry:
2QLZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2QLZ entry

There are 4 chains in PDB entry 2QLZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 2ARG 225
B
 MSE 1ARG 225
C
 GLU 2ILE 223
D
 MSE 1ARG 225
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 33 helices in PDB entry 2QLZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
4 10Right-handed alpha
Helix 2
2
A
11 22Right-handed alpha
Helix 3
3
A
38 52Right-handed alpha
Helix 4
4
A
117 161Right-handed alpha
Helix 5
5
A
165 176Right-handed alpha
Helix 6
6
A
181 189Right-handed alpha
Helix 7
7
A
191 203Right-handed alpha
Helix 8
8
A
219 225Right-handed alpha
Helix 9
9
B
4 10Right-handed alpha
Helix 10
10
B
11 22Right-handed alpha
Helix 11
11
B
40 52Right-handed alpha
Helix 12
12
B
117 161Right-handed alpha
Helix 13
13
B
163 177Right-handed alpha
Helix 14
14
B
181 189Right-handed alpha
Helix 15
15
B
191 203Right-handed alpha
Helix 16
16
B
219 225Right-handed alpha
Helix 17
17
C
4 10Right-handed alpha
Helix 18
18
C
11 22Right-handed alpha
Helix 19
19
C
23 27Right-handed 310
Helix 20
20
C
38 52Right-handed alpha
Helix 21
21
C
117 161Right-handed alpha
Helix 22
22
C
163 177Right-handed alpha
Helix 23
23
C
181 188Right-handed alpha
Helix 24
24
C
191 203Right-handed alpha
Helix 25
25
D
4 10Right-handed alpha
Helix 26
26
D
11 22Right-handed alpha
Helix 27
27
D
23 27Right-handed 310
Helix 28
28
D
38 52Right-handed alpha
Helix 29
29
D
117 161Right-handed alpha
Helix 30
30
D
163 177Right-handed alpha
Helix 31
31
D
181 189Right-handed alpha
Helix 32
32
D
191 203Right-handed alpha
Helix 33
33
D
219 225Right-handed alpha
Back to top of page

There are 12 sheets in PDB entry 2QLZ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 60first strand
Strand 2
A
69 74anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
88 95first strand
Strand 2
A
78 85anti-parallel
Strand 3
B
78 84anti-parallel
Strand 4
B
89 95anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
104 107first strand
Strand 2
B
103 106anti-parallel
Strand 3
D
35 36parallel
Back to list of sheets
Back to top of page

There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
178 180first strand
Strand 2
A
215 218anti-parallel
Strand 3
A
208 211anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
55 59first strand
Strand 2
B
70 74anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
178 180first strand
Strand 2
B
215 218anti-parallel
Strand 3
B
208 211anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
55 59first strand
Strand 2
C
70 74anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
89 95first strand
Strand 2
C
78 84anti-parallel
Strand 3
D
78 85anti-parallel
Strand 4
D
88 95anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
104 107first strand
Strand 2
D
103 106anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
178 180first strand
Strand 2
C
215 218anti-parallel
Strand 3
C
208 211anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
55 58first strand
Strand 2
D
71 74anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
178 180first strand
Strand 2
D
215 218anti-parallel
Strand 3
D
208 211anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il