Analysis of interatomic Contacts of Structural Units in PDB entry:
2QM3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2QM3 entry

There is 1 chain in PDB entry 2QM3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN -7ASN 342
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 2QM3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
-1 10Right-handed alpha
Helix 2
2
A
17 31Right-handed alpha
Helix 3
3
A
33 42Right-handed alpha
Helix 4
4
A
44 58Right-handed alpha
Helix 5
5
A
70 81Right-handed alpha
Helix 6
6
A
100 102Right-handed 310
Helix 7
7
A
103 115Right-handed alpha
Helix 8
8
A
121 125Right-handed 310
Helix 9
9
A
130 144Right-handed alpha
Helix 10
10
A
160 169Right-handed alpha
Helix 11
11
A
180 195Right-handed alpha
Helix 12
12
A
228 242Right-handed alpha
Helix 13
13
A
260 274Right-handed alpha
Helix 14
14
A
294 297Right-handed 310
Helix 15
15
A
298 304Right-handed alpha
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There are 2 sheets in PDB entry 2QM3. Click on sheet of interest to get list of strands forming it: A, B,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
61 62first strand
Strand 2
A
68 69anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
199 202first strand
Strand 2
A
173 177parallel
Strand 3
A
151 155parallel
Strand 4
A
220 223parallel
Strand 5
A
249 254parallel
Strand 6
A
316 323anti-parallel
Strand 7
A
278 288anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il