Analysis of interatomic Contacts of Structural Units in PDB entry:
2QPP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2QPP entry

There are 2 chains in PDB entry 2QPP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 29SER 242
B
 MET 30THR 248
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 2QPP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
32 41Right-handed alpha
Helix 2
2
A
41 50Right-handed alpha
Helix 3
3
A
51 60Right-handed alpha
Helix 4
4
A
63 88Right-handed alpha
Helix 5
5
A
94 98Right-handed 310
Helix 6
6
A
105 118Right-handed alpha
Helix 7
7
A
121 125Right-handed 310
Helix 8
8
A
128 145Right-handed alpha
Helix 9
9
A
148 176Right-handed alpha
Helix 10
10
A
184 188Right-handed 310
Helix 11
11
A
194 209Right-handed alpha
Helix 12
12
A
212 242Right-handed alpha
Helix 13
13
B
32 41Right-handed alpha
Helix 14
14
B
41 50Right-handed alpha
Helix 15
15
B
51 59Right-handed alpha
Helix 16
16
B
63 88Right-handed alpha
Helix 17
17
B
94 98Right-handed 310
Helix 18
18
B
99 104Right-handed alpha
Helix 19
19
B
105 118Right-handed alpha
Helix 20
20
B
120 125Right-handed alpha
Helix 21
21
B
128 145Right-handed alpha
Helix 22
22
B
148 176Right-handed alpha
Helix 23
23
B
184 188Right-handed 310
Helix 24
24
B
194 208Right-handed alpha
Helix 25
25
B
212 248Right-handed alpha
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There are no sheets in PDB entry 2QPP
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il