Analysis of interatomic Contacts of Structural Units in PDB entry:
2QQ5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2QQ5 entry

There is 1 chain in PDB entry 2QQ5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 3TYR 262
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 2QQ5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
17 30Right-handed alpha
Helix 2
2
A
40 55Right-handed alpha
Helix 3
3
A
67 83Right-handed alpha
Helix 4
4
A
96 103Right-handed alpha
Helix 5
5
A
114 121Right-handed alpha
Helix 6
6
A
124 139Right-handed alpha
Helix 7
7
A
140 142Right-handed 310
Helix 8
8
A
151 155Right-handed 310
Helix 9
9
A
160 182Right-handed alpha
Helix 10
10
A
183 185Right-handed 310
Helix 11
11
A
224 241Right-handed alpha
Helix 12
12
A
244 249Right-handed 310
Helix 13
13
A
255 262Right-handed alpha
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There is 1 sheet ( A) in PDB entry 2QQ5.

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 62first strand
Strand 2
A
33 38parallel
Strand 3
A
9 12parallel
Strand 4
A
88 91parallel
Strand 5
A
145 149parallel
Strand 6
A
187 192parallel
Strand 7
A
252 254parallel
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