Analysis of interatomic Contacts of Structural Units in PDB entry:
2QR6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2QR6 entry

There is 1 chain in PDB entry 2QR6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN -5ASN 374
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 2QR6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
-5 3Right-handed alpha
Helix 2
2
A
18 20Right-handed 310
Helix 3
3
A
32 36Right-handed 310
Helix 4
4
A
61 71Right-handed alpha
Helix 5
5
A
88 118Right-handed alpha
Helix 6
6
A
121 135Right-handed alpha
Helix 7
7
A
147 158Right-handed alpha
Helix 8
8
A
183 191Right-handed alpha
Helix 9
9
A
202 211Right-handed alpha
Helix 10
10
A
225 230Right-handed alpha
Helix 11
11
A
235 255Right-handed alpha
Helix 12
12
A
269 280Right-handed alpha
Helix 13
13
A
287 293Right-handed 310
Helix 14
14
A
304 309Right-handed 310
Helix 15
15
A
329 336Right-handed alpha
Helix 16
16
A
346 359Right-handed alpha
Helix 17
17
A
362 367Right-handed alpha
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There are 5 sheets in PDB entry 2QR6. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 8first strand
Strand 2
A
11 14anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
22 24first strand
Strand 2
A
371 373anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
40 42first strand
Strand 2
A
45 47anti-parallel
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There are 8 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
51 53first strand
Strand 2
A
283 286parallel
Strand 3
A
260 263parallel
Strand 4
A
216 219parallel
Strand 5
A
195 198parallel
Strand 6
A
162 166parallel
Strand 7
A
140 143parallel
Strand 8
A
76 78parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
301 302first strand
Strand 2
A
318 319anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il