Analysis of interatomic Contacts of Structural Units in PDB entry:
2QV3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2QV3 entry

There is 1 chain in PDB entry 2QV3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 355THR 811
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 2QV3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
683 687Right-handed 310
Helix 2
2
A
717 724Right-handed alpha
Helix 3
3
A
742 754Right-handed alpha
Helix 4
4
A
755 761Right-handed alpha
Helix 5
5
A
762 769Right-handed 310
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There are 8 sheets in PDB entry 2QV3. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 15 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
357 363first strand
Strand 2
A
385 395parallel
Strand 3
A
412 415parallel
Strand 4
A
449 452parallel
Strand 5
A
462 477parallel
Strand 6
A
484 502parallel
Strand 7
A
512 519parallel
Strand 8
A
540 547parallel
Strand 9
A
559 574parallel
Strand 10
A
579 596parallel
Strand 11
A
620 623parallel
Strand 12
A
641 645parallel
Strand 13
A
679 682parallel
Strand 14
A
726 730parallel
Strand 15
A
733 734anti-parallel
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There are 12 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
357 363first strand
Strand 2
A
385 395parallel
Strand 3
A
412 415parallel
Strand 4
A
449 452parallel
Strand 5
A
462 477parallel
Strand 6
A
484 502parallel
Strand 7
A
512 519parallel
Strand 8
A
540 547parallel
Strand 9
A
559 574parallel
Strand 10
A
579 596parallel
Strand 11
A
606 615parallel
Strand 12
A
627 631parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
357 363first strand
Strand 2
A
385 395parallel
Strand 3
A
419 421parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
378 381first strand
Strand 2
A
404 408parallel
Strand 3
A
435 441parallel
Strand 4
A
462 477parallel
Strand 5
A
456 457parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
627 631first strand
Strand 2
A
606 615parallel
Strand 3
A
635 638parallel
Strand 4
A
659 664parallel
Strand 5
A
700 705parallel
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There are 7 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
530 535first strand
Strand 2
A
505 508parallel
Strand 3
A
484 502parallel
Strand 4
A
512 519parallel
Strand 5
A
540 547parallel
Strand 6
A
559 574parallel
Strand 7
A
530 535parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
654 655first strand
Strand 2
A
692 697parallel
Strand 3
A
786 791anti-parallel
Strand 4
A
778 782anti-parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
737 740first strand
Strand 2
A
771 774anti-parallel
Strand 3
A
804 806anti-parallel
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