Analysis of interatomic Contacts of Structural Units in PDB entry:
2QV6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2QV6 entry

There are 4 chains in PDB entry 2QV6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1PHE 253
B
 MET 1GLN 250
C
 MET 1ASP 252
D
 MET 1PHE 253
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 2QV6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 18Right-handed alpha
Helix 2
2
A
23 44Right-handed alpha
Helix 3
3
A
65 80Right-handed alpha
Helix 4
4
A
93 109Right-handed alpha
Helix 5
5
A
141 146Right-handed alpha
Helix 6
6
A
151 172Right-handed alpha
Helix 7
7
A
193 209Right-handed alpha
Helix 8
8
A
221 238Right-handed alpha
Helix 9
9
B
11 18Right-handed alpha
Helix 10
10
B
23 44Right-handed alpha
Helix 11
11
B
65 80Right-handed alpha
Helix 12
12
B
93 109Right-handed alpha
Helix 13
13
B
141 146Right-handed alpha
Helix 14
14
B
151 172Right-handed alpha
Helix 15
15
B
193 209Right-handed alpha
Helix 16
16
B
221 238Right-handed alpha
Helix 17
17
C
11 16Right-handed alpha
Helix 18
18
C
23 44Right-handed alpha
Helix 19
19
C
65 80Right-handed alpha
Helix 20
20
C
93 109Right-handed alpha
Helix 21
21
C
141 146Right-handed alpha
Helix 22
22
C
151 172Right-handed alpha
Helix 23
23
C
193 209Right-handed alpha
Helix 24
24
C
221 238Right-handed alpha
Helix 25
25
D
11 16Right-handed alpha
Helix 26
26
D
23 44Right-handed alpha
Helix 27
27
D
65 80Right-handed alpha
Helix 28
28
D
93 109Right-handed alpha
Helix 29
29
D
141 146Right-handed alpha
Helix 30
30
D
151 172Right-handed alpha
Helix 31
31
D
193 209Right-handed alpha
Helix 32
32
D
221 238Right-handed alpha
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There are 8 sheets in PDB entry 2QV6. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 50first strand
Strand 2
A
56 60anti-parallel
Strand 3
A
2 9anti-parallel
Strand 4
A
84 91anti-parallel
Strand 5
A
120 122parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
178 181first strand
Strand 2
A
184 188anti-parallel
Strand 3
A
132 139anti-parallel
Strand 4
A
212 219anti-parallel
Strand 5
A
245 249parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
48 50first strand
Strand 2
B
56 60anti-parallel
Strand 3
B
2 9anti-parallel
Strand 4
B
84 91anti-parallel
Strand 5
B
120 122parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
178 181first strand
Strand 2
B
184 188anti-parallel
Strand 3
B
132 139anti-parallel
Strand 4
B
212 219anti-parallel
Strand 5
B
245 249parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
48 50first strand
Strand 2
C
56 60anti-parallel
Strand 3
C
2 9anti-parallel
Strand 4
C
84 91anti-parallel
Strand 5
C
120 122parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
178 181first strand
Strand 2
C
184 188anti-parallel
Strand 3
C
132 139anti-parallel
Strand 4
C
212 219anti-parallel
Strand 5
C
245 249parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
48 50first strand
Strand 2
D
56 60anti-parallel
Strand 3
D
2 9anti-parallel
Strand 4
D
84 91anti-parallel
Strand 5
D
120 122parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
178 181first strand
Strand 2
D
184 188anti-parallel
Strand 3
D
132 139anti-parallel
Strand 4
D
212 219anti-parallel
Strand 5
D
245 249parallel
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