Analysis of interatomic Contacts of Structural Units in PDB entry:
2QW5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2QW5 entry

There are 2 chains in PDB entry 2QW5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 6GLY 332
B
 SER 8GLY 332
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 2QW5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
15 17Right-handed 310
Helix 2
2
A
25 42Right-handed alpha
Helix 3
3
A
55 57Right-handed 310
Helix 4
4
A
58 76Right-handed alpha
Helix 5
5
A
99 120Right-handed alpha
Helix 6
6
A
146 176Right-handed alpha
Helix 7
7
A
194 203Right-handed alpha
Helix 8
8
A
216 223Right-handed alpha
Helix 9
9
A
225 240Right-handed alpha
Helix 10
10
A
261 273Right-handed alpha
Helix 11
11
A
285 290Right-handed alpha
Helix 12
12
A
312 332Right-handed alpha
Helix 13
13
B
15 17Right-handed 310
Helix 14
14
B
25 42Right-handed alpha
Helix 15
15
B
55 57Right-handed 310
Helix 16
16
B
58 76Right-handed alpha
Helix 17
17
B
99 120Right-handed alpha
Helix 18
18
B
146 175Right-handed alpha
Helix 19
19
B
194 204Right-handed alpha
Helix 20
20
B
216 223Right-handed alpha
Helix 21
21
B
225 239Right-handed alpha
Helix 22
22
B
261 273Right-handed alpha
Helix 23
23
B
285 290Right-handed alpha
Helix 24
24
B
312 332Right-handed alpha
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There are 2 sheets in PDB entry 2QW5. Click on sheet of interest to get list of strands forming it: A, B,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 13first strand
Strand 2
A
46 50parallel
Strand 3
A
82 86parallel
Strand 4
A
124 127parallel
Strand 5
A
178 181parallel
Strand 6
A
210 215parallel
Strand 7
A
242 247parallel
Strand 8
A
277 279parallel
Strand 9
A
10 13parallel
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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 13first strand
Strand 2
B
46 50parallel
Strand 3
B
82 86parallel
Strand 4
B
124 127parallel
Strand 5
B
178 181parallel
Strand 6
B
210 215parallel
Strand 7
B
242 247parallel
Strand 8
B
277 279parallel
Strand 9
B
10 13parallel
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