Analysis of interatomic Contacts of Structural Units in PDB entry:
2QZU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2QZU entry

There is 1 chain in PDB entry 2QZU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 18LEU 482
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 2QZU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
43 47Right-handed 310
Helix 2
2
A
53 62Right-handed alpha
Helix 3
3
A
75 86Right-handed alpha
Helix 4
4
A
88 93Right-handed alpha
Helix 5
5
A
102 106Right-handed 310
Helix 6
6
A
115 123Right-handed alpha
Helix 7
7
A
145 149Right-handed 310
Helix 8
8
A
159 163Right-handed 310
Helix 9
9
A
199 214Right-handed alpha
Helix 10
10
A
239 245Right-handed alpha
Helix 11
11
A
250 255Right-handed alpha
Helix 12
12
A
266 300Right-handed alpha
Helix 13
13
A
319 323Right-handed 310
Helix 14
14
A
330 335Right-handed alpha
Helix 15
15
A
357 359Right-handed 310
Helix 16
16
A
360 369Right-handed alpha
Helix 17
17
A
371 375Right-handed 310
Helix 18
18
A
384 391Right-handed alpha
Helix 19
19
A
450 453Right-handed 310
Helix 20
20
A
454 472Right-handed alpha
Helix 21
21
A
474 480Right-handed 310
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There are 3 sheets in PDB entry 2QZU. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
168 172first strand
Strand 2
A
126 132parallel
Strand 3
A
222 228parallel
Strand 4
A
29 35parallel
Strand 5
A
306 311parallel
Strand 6
A
338 341anti-parallel
Strand 7
A
64 66anti-parallel
Strand 8
A
349 352parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
182 183first strand
Strand 2
A
194 195anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
399 404first strand
Strand 2
A
412 417anti-parallel
Strand 3
A
421 428anti-parallel
Strand 4
A
431 439anti-parallel
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