Analysis of interatomic Contacts of Structural Units in PDB entry:
2R0C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2R0C entry

There is 1 chain in PDB entry 2R0C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 2ALA 529
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 2R0C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
15 28Right-handed alpha
Helix 2
2
A
51 61Right-handed alpha
Helix 3
3
A
63 69Right-handed alpha
Helix 4
4
A
116 129Right-handed alpha
Helix 5
5
A
176 183Right-handed alpha
Helix 6
6
A
204 210Right-handed alpha
Helix 7
7
A
211 213Right-handed 310
Helix 8
8
A
253 262Right-handed alpha
Helix 9
9
A
295 297Right-handed 310
Helix 10
10
A
303 305Right-handed 310
Helix 11
11
A
306 328Right-handed alpha
Helix 12
12
A
337 353Right-handed alpha
Helix 13
13
A
374 391Right-handed alpha
Helix 14
14
A
392 398Right-handed 310
Helix 15
15
A
399 405Right-handed alpha
Helix 16
16
A
446 451Right-handed 310
Helix 17
17
A
465 476Right-handed alpha
Helix 18
18
A
487 495Right-handed alpha
Helix 19
19
A
517 526Right-handed alpha
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There are 6 sheets in PDB entry 2R0C. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
132 133first strand
Strand 2
A
32 35parallel
Strand 3
A
5 12parallel
Strand 4
A
160 170parallel
Strand 5
A
148 154anti-parallel
Strand 6
A
136 143anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
132 133first strand
Strand 2
A
32 35parallel
Strand 3
A
5 12parallel
Strand 4
A
160 170parallel
Strand 5
A
291 293parallel
Strand 6
A
287 288anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 50first strand
Strand 2
A
113 114anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
90 94first strand
Strand 2
A
80 83anti-parallel
Strand 3
A
216 222parallel
Strand 4
A
225 231anti-parallel
Strand 5
A
237 243anti-parallel
Strand 6
A
193 201anti-parallel
Strand 7
A
269 278anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
281 282first strand
Strand 2
A
299 300anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
480 485first strand
Strand 2
A
455 460parallel
Strand 3
A
498 501anti-parallel
Strand 4
A
507 511anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il