Analysis of interatomic Contacts of Structural Units in PDB entry:
2R16


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2R16 entry

There is 1 chain in PDB entry 2R16 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 723PHE 906
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There is 1 helix in PDB entry 2R16. Click on helix number for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
886 892Right-handed alpha
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There are 3 sheets in PDB entry 2R16. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
837 841first strand
Strand 2
A
827 832anti-parallel
Strand 3
A
817 824anti-parallel
Strand 4
A
746 754anti-parallel
Strand 5
A
873 881anti-parallel
Strand 6
A
884 885anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
837 841first strand
Strand 2
A
827 832anti-parallel
Strand 3
A
817 824anti-parallel
Strand 4
A
746 754anti-parallel
Strand 5
A
873 881anti-parallel
Strand 6
A
725 729anti-parallel
Strand 7
A
903 905anti-parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
803 807first strand
Strand 2
A
782 788anti-parallel
Strand 3
A
773 779anti-parallel
Strand 4
A
760 766anti-parallel
Strand 5
A
849 856anti-parallel
Strand 6
A
734 744anti-parallel
Strand 7
A
898 900anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il