Analysis of interatomic Contacts of Structural Units in PDB entry:
2R2J


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2R2J entry

There is 1 chain in PDB entry 2R2J (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 3ARG 372
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 2R2J. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 17Right-handed alpha
Helix 2
2
A
29 47Right-handed alpha
Helix 3
3
A
66 73Right-handed alpha
Helix 4
4
A
99 112Right-handed alpha
Helix 5
5
A
143 157Right-handed alpha
Helix 6
6
A
200 213Right-handed alpha
Helix 7
7
A
220 229Right-handed alpha
Helix 8
8
A
244 258Right-handed alpha
Helix 9
9
A
259 262Right-handed 310
Helix 10
10
A
275 282Right-handed alpha
Helix 11
11
A
285 289Right-handed 310
Helix 12
12
A
306 311Right-handed 310
Helix 13
13
A
313 325Right-handed alpha
Helix 14
14
A
357 362Right-handed 310
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There are 4 sheets in PDB entry 2R2J. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 62first strand
Strand 2
A
19 25parallel
Strand 3
A
80 85anti-parallel
Strand 4
A
88 93anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
77 78first strand
Strand 2
A
369 370anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
116 118first strand
Strand 2
A
161 166parallel
Strand 3
A
133 138parallel
Strand 4
A
179 183anti-parallel
Strand 5
A
192 193anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
217 218first strand
Strand 2
A
266 271parallel
Strand 3
A
234 239parallel
Strand 4
A
291 295anti-parallel
Strand 5
A
300 302anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il