Analysis of interatomic Contacts of Structural Units in PDB entry:
2R59


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2R59 entry

There is 1 chain in PDB entry 2R59 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 1ASP 610
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 2R59. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
79 83Right-handed 310
Helix 2
2
A
119 123Right-handed 310
Helix 3
3
A
139 143Right-handed 310
Helix 4
4
A
198 202Right-handed 310
Helix 5
5
A
223 225Right-handed 310
Helix 6
6
A
226 234Right-handed alpha
Helix 7
7
A
236 249Right-handed alpha
Helix 8
8
A
280 283Right-handed 310
Helix 9
9
A
290 299Right-handed alpha
Helix 10
10
A
310 312Right-handed 310
Helix 11
11
A
313 334Right-handed alpha
Helix 12
12
A
334 357Right-handed alpha
Helix 13
13
A
360 364Right-handed 310
Helix 14
14
A
373 378Right-handed alpha
Helix 15
15
A
380 398Right-handed alpha
Helix 16
16
A
399 415Right-handed alpha
Helix 17
17
A
420 432Right-handed alpha
Helix 18
18
A
435 441Right-handed alpha
Helix 19
19
A
443 450Right-handed alpha
Helix 20
20
A
465 478Right-handed alpha
Helix 21
21
A
479 486Right-handed 310
Helix 22
22
A
487 492Right-handed 310
Helix 23
23
A
495 508Right-handed alpha
Helix 24
24
A
513 525Right-handed alpha
Helix 25
25
A
526 529Right-handed 310
Helix 26
26
A
531 545Right-handed alpha
Helix 27
27
A
547 549Right-handed 310
Helix 28
28
A
550 561Right-handed alpha
Helix 29
29
A
563 577Right-handed alpha
Helix 30
30
A
577 592Right-handed alpha
Helix 31
31
A
593 595Right-handed 310
Helix 32
32
A
596 608Right-handed alpha
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There are 5 sheets in PDB entry 2R59. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
69 70first strand
Strand 2
A
59 66anti-parallel
Strand 3
A
99 108anti-parallel
Strand 4
A
33 44anti-parallel
Strand 5
A
16 28anti-parallel
Strand 6
A
154 163parallel
Strand 7
A
183 197anti-parallel
Strand 8
A
173 180anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 56first strand
Strand 2
A
84 94anti-parallel
Strand 3
A
73 75anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
115 118first strand
Strand 2
A
130 133anti-parallel
Strand 3
A
204 207anti-parallel
Strand 4
A
167 170anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
210 215first strand
Strand 2
A
218 222anti-parallel
Strand 3
A
257 260parallel
Strand 4
A
275 278parallel
Strand 5
A
269 270anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
306 308first strand
Strand 2
A
417 419parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il