Analysis of interatomic Contacts of Structural Units in PDB entry:
2R62


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2R62 entry

There are 2 chains in PDB entry 2R62 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 160LYS 418
B
 ILE 160LYS 418
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 2R62. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
178 191Right-handed alpha
Helix 2
2
A
191 199Right-handed alpha
Helix 3
3
A
215 225Right-handed alpha
Helix 4
4
A
254 261Right-handed alpha
Helix 5
5
A
270 274Right-handed 310
Helix 6
6
A
324 329Right-handed 310
Helix 7
7
A
346 355Right-handed alpha
Helix 8
8
A
377 391Right-handed alpha
Helix 9
9
A
401 407Right-handed alpha
Helix 10
10
B
176 183Right-handed alpha
Helix 11
11
B
183 191Right-handed alpha
Helix 12
12
B
195 199Right-handed 310
Helix 13
13
B
215 228Right-handed alpha
Helix 14
14
B
246 262Right-handed alpha
Helix 15
15
B
270 275Right-handed 310
Helix 16
16
B
296 301Right-handed alpha
Helix 17
17
B
319 323Right-handed 310
Helix 18
18
B
346 350Right-handed 310
Helix 19
19
B
352 356Right-handed 310
Helix 20
20
B
368 373Right-handed alpha
Helix 21
21
B
379 392Right-handed alpha
Helix 22
22
B
405 407Right-handed 310
Helix 23
23
B
408 414Right-handed alpha
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There are 2 sheets in PDB entry 2R62. Click on sheet of interest to get list of strands forming it: A, B,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
265 268first strand
Strand 2
A
312 315parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
205 209first strand
Strand 2
B
313 317parallel
Strand 3
B
266 268parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il