Analysis of interatomic Contacts of Structural Units in PDB entry:
2R6D


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2R6D entry

There are 6 chains in PDB entry 2R6D (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 10LEU 441
B
 PRO 10LEU 441
C
 PRO 10LEU 441
D
 PRO 10LEU 441
E
 PRO 10LEU 441
F
 PRO 10LEU 441
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are114 helices in PDB entry 2R6D. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
13 27Right-handed alpha
Helix 2
2
A
30 36Right-handed alpha
Helix 3
3
A
39 43Right-handed 310
Helix 4
4
A
45 60Right-handed alpha
Helix 5
5
A
66 77Right-handed alpha
Helix 6
6
A
86 95Right-handed alpha
Helix 7
7
A
98 100Right-handed 310
Helix 8
8
A
101 132Right-handed alpha
Helix 9
9
A
138 152Right-handed alpha
Helix 10
10
A
162 179Right-handed alpha
Helix 11
11
A
190 197Right-handed alpha
Helix 12
12
A
215 231Right-handed alpha
Helix 13
13
A
243 257Right-handed alpha
Helix 14
14
A
259 265Right-handed alpha
Helix 15
15
A
269 285Right-handed alpha
Helix 16
16
A
297 313Right-handed alpha
Helix 17
17
A
321 325Right-handed 310
Helix 18
18
A
338 354Right-handed alpha
Helix 19
19
A
377 382Right-handed alpha
Helix 20
20
A
385 390Right-handed alpha
Helix 21
21
B
13 27Right-handed alpha
Helix 22
22
B
30 38Right-handed alpha
Helix 23
23
B
39 43Right-handed 310
Helix 24
24
B
45 60Right-handed alpha
Helix 25
25
B
66 77Right-handed alpha
Helix 26
26
B
86 96Right-handed alpha
Helix 27
27
B
105 132Right-handed alpha
Helix 28
28
B
140 148Right-handed alpha
Helix 29
29
B
190 198Right-handed alpha
Helix 30
30
B
215 231Right-handed alpha
Helix 31
31
B
243 257Right-handed alpha
Helix 32
32
B
259 266Right-handed alpha
Helix 33
33
B
269 285Right-handed alpha
Helix 34
34
B
297 310Right-handed alpha
Helix 35
35
B
321 325Right-handed 310
Helix 36
36
B
338 354Right-handed alpha
Helix 37
37
B
377 382Right-handed alpha
Helix 38
38
B
385 390Right-handed alpha
Helix 39
39
C
13 25Right-handed alpha
Helix 40
40
C
30 38Right-handed alpha
Helix 41
41
C
39 43Right-handed 310
Helix 42
42
C
45 60Right-handed alpha
Helix 43
43
C
66 77Right-handed alpha
Helix 44
44
C
85 96Right-handed alpha
Helix 45
45
C
105 132Right-handed alpha
Helix 46
46
C
138 147Right-handed alpha
Helix 47
47
C
162 174Right-handed alpha
Helix 48
48
C
174 179Right-handed alpha
Helix 49
49
C
190 198Right-handed alpha
Helix 50
50
C
215 231Right-handed alpha
Helix 51
51
C
243 257Right-handed alpha
Helix 52
52
C
259 266Right-handed alpha
Helix 53
53
C
269 285Right-handed alpha
Helix 54
54
C
297 310Right-handed alpha
Helix 55
55
C
321 325Right-handed 310
Helix 56
56
C
338 354Right-handed alpha
Helix 57
57
C
377 382Right-handed alpha
Helix 58
58
C
385 390Right-handed alpha
Helix 59
59
D
13 27Right-handed alpha
Helix 60
60
D
30 36Right-handed alpha
Helix 61
61
D
39 43Right-handed 310
Helix 62
62
D
45 60Right-handed alpha
Helix 63
63
D
66 77Right-handed alpha
Helix 64
64
D
85 96Right-handed alpha
Helix 65
65
D
105 132Right-handed alpha
Helix 66
66
D
143 148Right-handed alpha
Helix 67
67
D
190 198Right-handed alpha
Helix 68
68
D
215 231Right-handed alpha
Helix 69
69
D
243 257Right-handed alpha
Helix 70
70
D
259 265Right-handed alpha
Helix 71
71
D
269 285Right-handed alpha
Helix 72
72
D
297 310Right-handed alpha
Helix 73
73
D
321 325Right-handed 310
Helix 74
74
D
338 354Right-handed alpha
Helix 75
75
D
377 382Right-handed alpha
Helix 76
76
D
385 390Right-handed alpha
Helix 77
77
E
13 27Right-handed alpha
Helix 78
78
E
30 36Right-handed alpha
Helix 79
79
E
39 43Right-handed 310
Helix 80
80
E
45 60Right-handed alpha
Helix 81
81
E
66 77Right-handed alpha
Helix 82
82
E
85 96Right-handed alpha
Helix 83
83
E
105 132Right-handed alpha
Helix 84
84
E
143 148Right-handed alpha
Helix 85
85
E
161 174Right-handed alpha
Helix 86
86
E
190 198Right-handed alpha
Helix 87
87
E
215 231Right-handed alpha
Helix 88
88
E
243 257Right-handed alpha
Helix 89
89
E
259 266Right-handed alpha
Helix 90
90
E
269 285Right-handed alpha
Helix 91
91
E
297 310Right-handed alpha
Helix 92
92
E
321 325Right-handed 310
Helix 93
93
E
338 354Right-handed alpha
Helix 94
94
E
376 380Right-handed 310
Helix 95
95
E
385 390Right-handed alpha
Helix 96
96
F
13 27Right-handed alpha
Helix 97
97
F
30 38Right-handed alpha
Helix 98
98
F
39 43Right-handed 310
Helix 99
99
F
45 59Right-handed alpha
Helix 100
100
F
66 77Right-handed alpha
Helix 101
101
F
85 96Right-handed alpha
Helix 102
102
F
105 132Right-handed alpha
Helix 103
103
F
141 148Right-handed alpha
Helix 104
104
F
165 174Right-handed alpha
Helix 105
105
F
190 198Right-handed alpha
Helix 106
106
F
215 231Right-handed alpha
Helix 107
107
F
243 257Right-handed alpha
Helix 108
108
F
259 266Right-handed alpha
Helix 109
109
F
269 285Right-handed alpha
Helix 110
110
F
297 310Right-handed alpha
Helix 111
111
F
321 325Right-handed 310
Helix 112
112
F
338 354Right-handed alpha
Helix 113
113
F
376 380Right-handed 310
Helix 114
114
F
385 390Right-handed alpha
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There are 6 sheets in PDB entry 2R6D. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
160 161first strand
Strand 2
F
288 291anti-parallel
Strand 3
F
235 239parallel
Strand 4
F
316 320parallel
Strand 5
F
357 362parallel
Strand 6
F
205 210parallel
Strand 7
F
392 396parallel
Strand 8
F
411 419anti-parallel
Strand 9
F
425 432anti-parallel
Strand 10
F
437 439anti-parallel
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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
288 291first strand
Strand 2
A
235 239parallel
Strand 3
A
316 320parallel
Strand 4
A
357 362parallel
Strand 5
A
205 210parallel
Strand 6
A
392 396parallel
Strand 7
A
411 419anti-parallel
Strand 8
A
425 432anti-parallel
Strand 9
A
437 439anti-parallel
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There are 9 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
288 291first strand
Strand 2
B
235 239parallel
Strand 3
B
316 320parallel
Strand 4
B
357 362parallel
Strand 5
B
205 210parallel
Strand 6
B
392 396parallel
Strand 7
B
411 419anti-parallel
Strand 8
B
425 432anti-parallel
Strand 9
B
437 439anti-parallel
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There are 9 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
288 291first strand
Strand 2
C
235 239parallel
Strand 3
C
316 320parallel
Strand 4
C
357 361parallel
Strand 5
C
205 209parallel
Strand 6
C
392 396parallel
Strand 7
C
411 419anti-parallel
Strand 8
C
425 432anti-parallel
Strand 9
C
437 439anti-parallel
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There are 9 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
288 291first strand
Strand 2
D
235 239parallel
Strand 3
D
316 320parallel
Strand 4
D
357 362parallel
Strand 5
D
205 210parallel
Strand 6
D
392 396parallel
Strand 7
D
411 419anti-parallel
Strand 8
D
425 432anti-parallel
Strand 9
D
437 439anti-parallel
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There are 9 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
288 291first strand
Strand 2
E
235 239parallel
Strand 3
E
316 320parallel
Strand 4
E
357 362parallel
Strand 5
E
205 210parallel
Strand 6
E
392 396parallel
Strand 7
E
411 419anti-parallel
Strand 8
E
425 432anti-parallel
Strand 9
E
437 439anti-parallel
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