Analysis of interatomic Contacts of Structural Units in PDB entry:
2RAU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2RAU entry

There is 1 chain in PDB entry 2RAU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 2ARG 353
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 2RAU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
61 68Right-handed alpha
Helix 2
2
A
79 82Right-handed 310
Helix 3
3
A
83 91Right-handed alpha
Helix 4
4
A
100 105Right-handed 310
Helix 5
5
A
110 118Right-handed 310
Helix 6
6
A
121 141Right-handed alpha
Helix 7
7
A
151 168Right-handed alpha
Helix 8
8
A
195 203Right-handed alpha
Helix 9
9
A
216 224Right-handed alpha
Helix 10
10
A
236 248Right-handed alpha
Helix 11
11
A
260 270Right-handed alpha
Helix 12
12
A
277 282Right-handed alpha
Helix 13
13
A
304 309Right-handed alpha
Helix 14
14
A
310 314Right-handed 310
Helix 15
15
A
327 332Right-handed 310
Helix 16
16
A
336 341Right-handed alpha
Helix 17
17
A
341 353Right-handed alpha
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There are 3 sheets in PDB entry 2RAU. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 14first strand
Strand 2
A
17 28anti-parallel
Strand 3
A
36 44anti-parallel
Strand 4
A
93 99anti-parallel
Strand 5
A
49 55parallel
Strand 6
A
145 150parallel
Strand 7
A
169 175parallel
Strand 8
A
296 301parallel
Strand 9
A
319 323parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
69 70first strand
Strand 2
A
73 74anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
206 208first strand
Strand 2
A
274 276anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il