Analysis of interatomic Contacts of Structural Units in PDB entry:
2RB4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2RB4 entry

There are 2 chains in PDB entry 2RB4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 307ASP 476
B
 LEU 307ASP 476
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 2RB4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
321 334Right-handed alpha
Helix 2
2
A
347 360Right-handed alpha
Helix 3
3
A
373 386Right-handed alpha
Helix 4
4
A
424 433Right-handed alpha
Helix 5
5
A
449 451Right-handed 310
Helix 6
6
A
452 464Right-handed alpha
Helix 7
7
B
321 334Right-handed alpha
Helix 8
8
B
347 360Right-handed alpha
Helix 9
9
B
373 386Right-handed alpha
Helix 10
10
B
424 433Right-handed alpha
Helix 11
11
B
449 451Right-handed 310
Helix 12
12
B
452 464Right-handed alpha
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There are 2 sheets in PDB entry 2RB4. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
365 368first strand
Strand 2
A
391 394parallel
Strand 3
A
340 344parallel
Strand 4
A
407 412parallel
Strand 5
A
442 448parallel
Strand 6
A
312 318parallel
Strand 7
A
468 470parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
365 368first strand
Strand 2
B
391 394parallel
Strand 3
B
340 344parallel
Strand 4
B
407 412parallel
Strand 5
B
442 448parallel
Strand 6
B
312 318parallel
Strand 7
B
467 470parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il