Analysis of interatomic Contacts of Structural Units in PDB entry:
2RBB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2RBB entry

There are 2 chains in PDB entry 2RBB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 32LEU 160
B
 ALA 34LEU 160
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 2RBB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
45 58Right-handed alpha
Helix 2
2
A
63 66Right-handed 310
Helix 3
3
A
85 91Right-handed alpha
Helix 4
4
A
92 97Right-handed 310
Helix 5
5
A
112 126Right-handed alpha
Helix 6
6
B
45 58Right-handed alpha
Helix 7
7
B
63 66Right-handed 310
Helix 8
8
B
85 91Right-handed alpha
Helix 9
9
B
93 97Right-handed 310
Helix 10
10
B
112 127Right-handed alpha
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There are 2 sheets in PDB entry 2RBB. Click on sheet of interest to get list of strands forming it: A, B,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 61first strand
Strand 2
A
70 74anti-parallel
Strand 3
A
79 83anti-parallel
Strand 4
A
35 42parallel
Strand 5
B
104 109anti-parallel
Strand 6
B
153 159parallel
Strand 7
B
141 147anti-parallel
Strand 8
B
129 136anti-parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
129 136first strand
Strand 2
A
141 147anti-parallel
Strand 3
A
153 159anti-parallel
Strand 4
A
104 109parallel
Strand 5
B
35 42anti-parallel
Strand 6
B
79 83parallel
Strand 7
B
70 74anti-parallel
Strand 8
B
60 61anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il