Analysis of interatomic Contacts of Structural Units in PDB entry:
2RBC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2RBC entry

There is 1 chain in PDB entry 2RBC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 6GLU 311
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 2RBC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
45 57Right-handed alpha
Helix 2
2
A
70 83Right-handed alpha
Helix 3
3
A
118 123Right-handed 310
Helix 4
4
A
129 134Right-handed alpha
Helix 5
5
A
145 159Right-handed alpha
Helix 6
6
A
171 179Right-handed alpha
Helix 7
7
A
180 182Right-handed 310
Helix 8
8
A
189 197Right-handed alpha
Helix 9
9
A
200 212Right-handed alpha
Helix 10
10
A
222 224Right-handed 310
Helix 11
11
A
251 266Right-handed alpha
Helix 12
12
A
269 286Right-handed alpha
Helix 13
13
A
289 294Right-handed 310
Helix 14
14
A
296 309Right-handed alpha
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There are 3 sheets in PDB entry 2RBC. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
85 86first strand
Strand 2
A
60 64parallel
Strand 3
A
9 13parallel
Strand 4
A
138 141parallel
Strand 5
A
163 167parallel
Strand 6
A
184 188parallel
Strand 7
A
216 220parallel
Strand 8
A
226 229anti-parallel
Strand 9
A
236 239anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 44first strand
Strand 2
A
17 23anti-parallel
Strand 3
A
99 105parallel
Strand 4
A
111 116anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
66 68first strand
Strand 2
A
91 93parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il