Analysis of interatomic Contacts of Structural Units in PDB entry:
2RBL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2RBL entry

There are 3 chains in PDB entry 2RBL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 803THR 891
B
 LEU 803THR 891
M
 LEU 803THR 891
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There is 1 helix in PDB entry 2RBL. Click on helix number for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
826 829Right-handed 310
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There are 7 sheets in PDB entry 2RBL. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
807 812first strand
Strand 2
A
819 824anti-parallel
Strand 3
B
857 860anti-parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
847 852first strand
Strand 2
A
831 839anti-parallel
Strand 3
A
868 877anti-parallel
Strand 4
A
880 881anti-parallel
Strand 5
M
846 850anti-parallel
Strand 6
M
832 839anti-parallel
Strand 7
M
868 877anti-parallel
Strand 8
M
880 881anti-parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
885 890first strand
Strand 2
A
868 877anti-parallel
Strand 3
A
880 881anti-parallel
Strand 4
M
846 850anti-parallel
Strand 5
M
832 839anti-parallel
Strand 6
M
868 877anti-parallel
Strand 7
M
885 890anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
857 860first strand
Strand 2
B
819 824anti-parallel
Strand 3
B
807 812anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
847 852first strand
Strand 2
B
831 839anti-parallel
Strand 3
B
868 877anti-parallel
Strand 4
B
880 881anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
847 852first strand
Strand 2
B
831 839anti-parallel
Strand 3
B
868 877anti-parallel
Strand 4
B
885 890anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
819 822first strand
Strand 2
M
857 860anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il