Analysis of interatomic Contacts of Structural Units in PDB entry:
2RC8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2RC8 entry

There are 2 chains in PDB entry 2RC8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 4TYR 287
B
 LYS 4LYS 288
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 2RC8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
42 55Right-handed alpha
Helix 2
2
A
61 63Right-handed 310
Helix 3
3
A
70 84Right-handed alpha
Helix 4
4
A
106 114Right-handed alpha
Helix 5
5
A
127 132Right-handed alpha
Helix 6
6
A
161 166Right-handed alpha
Helix 7
7
A
179 189Right-handed alpha
Helix 8
8
A
189 197Right-handed alpha
Helix 9
9
A
198 200Right-handed 310
Helix 10
10
A
203 213Right-handed alpha
Helix 11
11
A
225 234Right-handed alpha
Helix 12
12
A
261 276Right-handed alpha
Helix 13
13
A
277 287Right-handed alpha
Helix 14
14
B
42 54Right-handed alpha
Helix 15
15
B
61 63Right-handed 310
Helix 16
16
B
70 83Right-handed alpha
Helix 17
17
B
106 114Right-handed alpha
Helix 18
18
B
127 132Right-handed alpha
Helix 19
19
B
161 165Right-handed 310
Helix 20
20
B
166 170Right-handed 310
Helix 21
21
B
179 189Right-handed alpha
Helix 22
22
B
189 197Right-handed alpha
Helix 23
23
B
198 200Right-handed 310
Helix 24
24
B
203 213Right-handed alpha
Helix 25
25
B
225 234Right-handed alpha
Helix 26
26
B
261 276Right-handed alpha
Helix 27
27
B
277 288Right-handed alpha
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There are 12 sheets in PDB entry 2RC8. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
85 91first strand
Strand 2
A
5 11parallel
Strand 3
A
119 120parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
19 21first strand
Strand 2
A
65 69anti-parallel
Strand 3
A
33 36anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
100 101first strand
Strand 2
A
104 105anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
135 136first strand
Strand 2
A
255 256anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
173 174first strand
Strand 2
A
220 224parallel
Strand 3
A
141 150anti-parallel
Strand 4
A
240 242anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
173 174first strand
Strand 2
A
220 224parallel
Strand 3
A
141 150anti-parallel
Strand 4
A
247 252anti-parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
85 91first strand
Strand 2
B
5 11parallel
Strand 3
B
119 120parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
19 22first strand
Strand 2
B
65 69anti-parallel
Strand 3
B
33 36anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
100 101first strand
Strand 2
B
104 105anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
135 136first strand
Strand 2
B
255 256anti-parallel
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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
173 174first strand
Strand 2
B
220 224parallel
Strand 3
B
141 150anti-parallel
Strand 4
B
240 242anti-parallel
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There are 4 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
173 174first strand
Strand 2
B
220 224parallel
Strand 3
B
141 150anti-parallel
Strand 4
B
247 252anti-parallel
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